RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 EXTL3O43909 919 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 RECQL4O94761 1208 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 NR3C1P04150 777 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 CYP2J2P51589 502 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 POU5F1Q01860 360 aaKnown RBP21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 NFIL3Q16649 462 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 SLC9A9Q8IVB4 645 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 NELFBQ8WX92 580 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 MRPL9Q9BYD2 267 aaKnown RBP21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 HAPLN2Q9GZV7 340 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 TMEM117Q9H0C3 514 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 PRO3102Q9H379 93 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 PCIF1Q9H4Z3 704 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 RPF1Q9H9Y2 349 aaKnown RBP21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 TLL1O43897 1013 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 EXOC3O60645 756 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 CCDC192P0DO97 292 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 AKAP5P24588 427 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 DPCR1Q3MIW9 517 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 CRIPAKQ8N1N5 446 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 CEP120Q8N960 986 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 TMEM174Q8WUU8 243 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 RAD9AQ99638 391 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 FAM213AQ9BRX8 229 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 KANSL3Q9P2N6 904 aa21.99■■□□□ 1.11
RHBDD3-201ENST00000216085 RANBP2P49792 3224 aaKnown RBP21.98■■□□□ 1.11
RHBDD3-201ENST00000216085 DGKIO75912 1065 aa21.98■■□□□ 1.11
RHBDD3-201ENST00000216085 FGFR1P11362 822 aa21.98■■□□□ 1.11
RHBDD3-201ENST00000216085 CD44P16070 742 aaKnown RBP21.98■■□□□ 1.11
RHBDD3-201ENST00000216085 NR2F2P24468 414 aa21.98■■□□□ 1.11
RHBDD3-201ENST00000216085 PPP2R3AQ06190 1150 aa21.98■■□□□ 1.11
RHBDD3-201ENST00000216085 FOXR2Q6PJQ5 311 aa21.98■■□□□ 1.11
RHBDD3-201ENST00000216085 AGMOQ6ZNB7 445 aa21.98■■□□□ 1.11
RHBDD3-201ENST00000216085 HELQQ8TDG4 1101 aa21.98■■□□□ 1.11
RHBDD3-201ENST00000216085 SAAL1Q96ER3 474 aa21.98■■□□□ 1.11
RHBDD3-201ENST00000216085 SEMA6BQ9H3T3 888 aa21.98■■□□□ 1.11
RHBDD3-201ENST00000216085 FRMD4BQ9Y2L6 1034 aa21.98■■□□□ 1.11
RHBDD3-201ENST00000216085 MLH1P40692 756 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 ACOT2P49753 483 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 ZCWPW2Q504Y3 356 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 CD302Q8IX05 232 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 NAT10Q9H0A0 1025 aaKnown RBP21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 RNF39Q9H2S5 420 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 PLEKHA5Q9HAU0 1116 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 RWDD2AQ9UIY3 292 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 CPSF3Q9UKF6 684 aaKnown RBP21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 INPP5FQ9Y2H2 1132 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 SYCE3A1L190 88 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 ARL5CA6NH57 179 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 ZNF233A6NK53 670 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 TBKBP1A7MCY6 615 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 CETN3O15182 167 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 FKBP3Q00688 224 aaKnown RBP21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 TYRO3Q06418 890 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 RAB30Q15771 203 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 ZSCAN23Q3MJ62 389 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 SEZ6Q53EL9 994 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 TMCO2Q7Z6W1 182 aaPredicted RBP21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 CMTR2Q8IYT2 770 aaKnown RBP21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 LRRC43Q8N309 656 aa21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 RBAKQ9NYW8 714 aaPredicted RBP21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.97■■□□□ 1.11
RHBDD3-201ENST00000216085 FAM189A1O60320 539 aa21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 IL18RAPO95256 599 aa21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 FGFR1OPO95684 399 aaKnown RBP21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 CXCL8P10145 99 aa21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 ERCC5P28715 1186 aaPredicted RBP21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 HTRA4P83105 476 aaPredicted RBP21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 ADAM9Q13443 819 aa21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 BTG3Q14201 252 aaPredicted RBP21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 SNRNP35Q16560 246 aaKnown RBP21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 NOMO2Q5JPE7 1267 aa21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 CLLU1OSQ5K130 101 aa21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 SNX27Q96L92 541 aa21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 GAD1Q99259 594 aa21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 MSRAQ9UJ68 235 aa21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 COLQQ9Y215 455 aaPredicted RBP21.96■■□□□ 1.11
RHBDD3-201ENST00000216085 GOLGA8IPA6NC78 632 aa21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 GOLGA8JA6NMD2 632 aa21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 MEIS3P2A8K0S8 358 aa21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 OFD1O75665 1012 aa21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 TNFSF9P41273 254 aa21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 RNASELQ05823 741 aaKnown RBP21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 SURF1Q15526 300 aa21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 TPD52L1Q16890 204 aaPredicted RBP21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 CEP135Q66GS9 1140 aa21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 ANKRD40Q6AI12 368 aa21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 USP37Q86T82 979 aa21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 TSPAN18Q96SJ8 248 aa21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 KLK14Q9P0G3 267 aa21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 PCDHA11Q9Y5I1 949 aa21.95■■□□□ 1.1
RHBDD3-201ENST00000216085 TRIM49BA6NDI0 452 aa21.94■■□□□ 1.1
RHBDD3-201ENST00000216085 ENOX2Q16206 610 aaKnown RBP21.94■■□□□ 1.1
RHBDD3-201ENST00000216085 BRSK2Q8IWQ3 736 aa21.94■■□□□ 1.1
RHBDD3-201ENST00000216085 TMEM192Q8IY95 271 aa21.94■■□□□ 1.1
RHBDD3-201ENST00000216085 ZNF689Q96CS4 500 aaPredicted RBP21.94■■□□□ 1.1
RHBDD3-201ENST00000216085 FAM212AQ96EL1 285 aa21.94■■□□□ 1.1
RHBDD3-201ENST00000216085 FBXL18Q96ME1 805 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms