RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 HERC5Q9UII4 1024 aaKnown RBP12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 G3BP2Q9UN86 482 aaKnown RBP12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 GPR75-ASB3A0A0A6YYF3 556 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 CDH16O75309 829 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 TMPRSS15P98073 1019 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 DNAJC3Q13217 504 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 PPP2R5CQ13362 524 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 SNAPC2Q13487 334 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 XKR9Q5GH70 373 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 ARHGEF16Q5VV41 709 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 ZDHHC15Q96MV8 337 aa12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 CHORDC1Q9UHD1 332 aaPredicted RBP12.28□□□□□ -0.44
DNMT3B-201ENST00000201963 ENTPD3O75355 529 aa12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 TOM1L1O75674 476 aa12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 EGFRP00533 1210 aa12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 CDK17Q00537 523 aa12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 GEN1Q17RS7 908 aa12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 LRRC36Q1X8D7 754 aa12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 BRDTQ58F21 947 aaPredicted RBP12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 WDR59Q6PJI9 974 aa12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 LDHDQ86WU2 507 aa12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 RNF25Q96BH1 459 aaPredicted RBP12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 ANO3Q9BYT9 981 aa12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 RPAP3Q9H6T3 665 aaPredicted RBP12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 SPC25Q9HBM1 224 aa12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 C15orf41Q9Y2V0 281 aa12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 REXO2Q9Y3B8 237 aaKnown RBP12.27□□□□□ -0.44
DNMT3B-201ENST00000201963 H7C0C1 242 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 GNAT1P11488 350 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 CYP2B6P20813 491 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 TARSP26639 723 aaKnown RBP12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 SOX5P35711 763 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 ATP5OP48047 213 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 KCTD19Q17RG1 926 aaPredicted RBP12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 PDIK1LQ8N165 341 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 ZNF280CQ8ND82 737 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 RAET1EQ8TD07 263 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 NAF1Q96HR8 494 aaKnown RBP12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 NUP85Q9BW27 656 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 ZFATQ9P243 1243 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 GOLGA8RI6L899 631 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 TRAPPC3O43617 180 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 CPP00450 1065 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 FOSP01100 380 aaPredicted RBP12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 Q3C1V9 767 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 SNRNP48Q6IEG0 339 aaKnown RBP12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 SLC17A8Q8NDX2 589 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 OPTNQ96CV9 577 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 HSD3B7Q9H2F3 369 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 NPHS2Q9NP85 383 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 KBTBD4Q9NVX7 518 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 NDE1Q9NXR1 346 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 FAM53CQ9NYF3 392 aa12.27□□□□□ -0.45
DNMT3B-201ENST00000201963 SPECC1L-ADORA2AF8WAN1 911 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 ZWINTO95229 277 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 MEA1Q16626 185 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 HADHQ16836 314 aaKnown RBP12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 SCYL2Q6P3W7 929 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 TPCN2Q8NHX9 752 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 CCDC124Q96CT7 223 aaKnown RBP12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 SEMA6BQ9H3T3 888 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 TRABDQ9H4I3 376 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 DOT1LQ8TEK3 1739 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 ANKRD26Q9UPS8 1709 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 PITPNM2Q9BZ72 1349 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 PHF2O75151 1096 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 HOXA13P31271 388 aaPredicted RBP12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 NR1H3Q13133 447 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 IZUMO3Q5VZ72 239 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 RCSD1Q6JBY9 416 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 ACER1Q8TDN7 264 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 PAPOLBQ9NRJ5 636 aaKnown RBP12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 CPA4Q9UI42 421 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 ALG6Q9Y672 507 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 hCG_1984214I3L0E3 225 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 HNRNPDLO14979 420 aaKnown RBP12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 CLDN3O15551 220 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 KITP10721 976 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 PGM1P36871 562 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 PDE1BQ01064 536 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 C12orf60Q5U649 245 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 YTHDF3Q7Z739 585 aaKnown RBP12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 ZNF713Q8N859 430 aaPredicted RBP12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 SNF8Q96H20 258 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 UBN1Q9NPG3 1134 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 KCPQ6ZWJ8 1503 aa12.26□□□□□ -0.45
DNMT3B-201ENST00000201963 PNMA6FA0A0J9YX94 578 aa12.25□□□□□ -0.45
DNMT3B-201ENST00000201963 F8VZ95 297 aa12.25□□□□□ -0.45
DNMT3B-201ENST00000201963 GSTA1P08263 222 aa12.25□□□□□ -0.45
DNMT3B-201ENST00000201963 KRT19P08727 400 aa12.25□□□□□ -0.45
DNMT3B-201ENST00000201963 UBTFL6P0CB48 400 aaPredicted RBP12.25□□□□□ -0.45
DNMT3B-201ENST00000201963 NCF2P19878 526 aaPredicted RBP12.25□□□□□ -0.45
DNMT3B-201ENST00000201963 BPIFB4P59827 614 aa12.25□□□□□ -0.45
DNMT3B-201ENST00000201963 ITIH4Q14624 930 aa12.25□□□□□ -0.45
DNMT3B-201ENST00000201963 GJB7Q6PEY0 223 aa12.25□□□□□ -0.45
DNMT3B-201ENST00000201963 NME8Q8N427 588 aa12.25□□□□□ -0.45
DNMT3B-201ENST00000201963 DUSP9Q99956 384 aaKnown RBP12.25□□□□□ -0.45
DNMT3B-201ENST00000201963 DDX4Q9NQI0 724 aaKnown RBP12.25□□□□□ -0.45
DNMT3B-201ENST00000201963 SUCLA2Q9P2R7 463 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms