RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.55■■□□□ 1.52
TARBP1-201ENST00000040877 DCCP43146 1447 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 SNX2O60749 519 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 MMEP08473 750 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 HSD17B4P51659 736 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 ZNF211Q13398 564 aaPredicted RBP24.55■■□□□ 1.52
TARBP1-201ENST00000040877 GIPC2Q8TF65 315 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 PPP1R9AQ9ULJ8 1098 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 FAM205CA6NFA0 338 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 CYP26A1O43174 497 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 CD4P01730 458 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 CDH6P55285 790 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 GPS1Q13098 491 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 SNRNP35Q16560 246 aaKnown RBP24.54■■□□□ 1.52
TARBP1-201ENST00000040877 SAMD3Q8N6K7 520 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 TTC17Q96AE7 1141 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 DEFB129Q9H1M3 183 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 TMEM132DQ14C87 1099 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 SLC15A2Q16348 729 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 GPRASP2Q96D09 838 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 AGAP1Q9UPQ3 857 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 DIP2BQ9P265 1576 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 DDX47Q9H0S4 455 aaKnown RBP24.54■■□□□ 1.52
TARBP1-201ENST00000040877 COPS2P61201 443 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 APPL2Q8NEU8 664 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 TRIM15Q9C019 465 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 SLC38A7Q9NVC3 462 aa24.54■■□□□ 1.52
TARBP1-201ENST00000040877 PRMT7Q9NVM4 692 aaPredicted RBP24.54■■□□□ 1.52
TARBP1-201ENST00000040877 TARSL2A2RTX5 802 aaKnown RBP24.53■■□□□ 1.52
TARBP1-201ENST00000040877 ZBBXA8MT70 800 aa24.53■■□□□ 1.52
TARBP1-201ENST00000040877 EPM2AIP1Q7L775 607 aaPredicted RBP24.53■■□□□ 1.52
TARBP1-201ENST00000040877 POLR3CQ9BUI4 534 aaPredicted RBP24.53■■□□□ 1.52
TARBP1-201ENST00000040877 C17orf75Q9HAS0 396 aa24.53■■□□□ 1.52
TARBP1-201ENST00000040877 MYMKA6NI61 221 aa24.53■■□□□ 1.52
TARBP1-201ENST00000040877 GAS2O43903 313 aaKnown RBP24.53■■□□□ 1.52
TARBP1-201ENST00000040877 HBP1O60381 514 aa24.53■■□□□ 1.52
TARBP1-201ENST00000040877 IGSF9BQ9UPX0 1349 aa24.53■■□□□ 1.52
TARBP1-201ENST00000040877 APOL1O14791 398 aa24.53■■□□□ 1.52
TARBP1-201ENST00000040877 DYNC1LI2O43237 492 aaPredicted RBP24.53■■□□□ 1.52
TARBP1-201ENST00000040877 PRKCEQ02156 737 aa24.53■■□□□ 1.52
TARBP1-201ENST00000040877 R3HDM1Q15032 1099 aaKnown RBP24.53■■□□□ 1.52
TARBP1-201ENST00000040877 CC2D1AQ6P1N0 951 aaPredicted RBP24.53■■□□□ 1.52
TARBP1-201ENST00000040877 GPRC5AQ8NFJ5 357 aa24.53■■□□□ 1.52
TARBP1-201ENST00000040877 TMEM143Q96AN5 459 aa24.53■■□□□ 1.52
TARBP1-201ENST00000040877 ATP5HO75947 161 aa24.53■■□□□ 1.52
TARBP1-201ENST00000040877 RFC1P35251 1148 aaPredicted RBP24.53■■□□□ 1.52
TARBP1-201ENST00000040877 SYT2Q8N9I0 419 aaPredicted RBP24.53■■□□□ 1.52
TARBP1-201ENST00000040877 NPHP3-ACAD11A0A0J9YXS1 232 aa24.52■■□□□ 1.52
TARBP1-201ENST00000040877 SETSIPP0DME0 302 aa24.52■■□□□ 1.52
TARBP1-201ENST00000040877 NME3Q13232 169 aa24.52■■□□□ 1.52
TARBP1-201ENST00000040877 NCOA4Q13772 614 aa24.52■■□□□ 1.52
TARBP1-201ENST00000040877 CLEC10AQ8IUN9 316 aa24.52■■□□□ 1.52
TARBP1-201ENST00000040877 RCOR2Q8IZ40 523 aa24.52■■□□□ 1.52
TARBP1-201ENST00000040877 MTIF3Q9H2K0 278 aaKnown RBP24.52■■□□□ 1.52
TARBP1-201ENST00000040877 SPATS2LQ9NUQ6 558 aaKnown RBP24.52■■□□□ 1.52
TARBP1-201ENST00000040877 ANGPTL2Q9UKU9 493 aa24.52■■□□□ 1.52
TARBP1-201ENST00000040877 APOBEC2Q9Y235 224 aaKnown RBP24.52■■□□□ 1.52
TARBP1-201ENST00000040877 E2F4Q16254 413 aa24.52■■□□□ 1.52
TARBP1-201ENST00000040877 ACAD11Q709F0 780 aa24.52■■□□□ 1.52
TARBP1-201ENST00000040877 ERAP1Q9NZ08 941 aa24.52■■□□□ 1.52
TARBP1-201ENST00000040877 RPSAP08865 295 aaKnown RBP24.52■■□□□ 1.52
TARBP1-201ENST00000040877 DPEP1P16444 411 aa24.52■■□□□ 1.52
TARBP1-201ENST00000040877 INTS5Q6P9B9 1019 aaKnown RBP24.52■■□□□ 1.52
TARBP1-201ENST00000040877 EHD2Q9NZN4 543 aa24.52■■□□□ 1.52
TARBP1-201ENST00000040877 RRN3P2A6NIE6 340 aa24.51■■□□□ 1.51
TARBP1-201ENST00000040877 FAM133BQ5BKY9 247 aaKnown RBP24.51■■□□□ 1.51
TARBP1-201ENST00000040877 ATL2Q8NHH9 583 aa24.51■■□□□ 1.51
TARBP1-201ENST00000040877 RNPC3Q96LT9 517 aaKnown RBP24.51■■□□□ 1.51
TARBP1-201ENST00000040877 MED15Q96RN5 788 aa24.51■■□□□ 1.51
TARBP1-201ENST00000040877 TRAIPQ9BWF2 469 aa24.51■■□□□ 1.51
TARBP1-201ENST00000040877 TTC7AQ9ULT0 858 aaPredicted RBP24.51■■□□□ 1.51
TARBP1-201ENST00000040877 NCK2O43639 380 aa24.51■■□□□ 1.51
TARBP1-201ENST00000040877 UCHL3P15374 230 aa24.51■■□□□ 1.51
TARBP1-201ENST00000040877 AP1B1Q10567 949 aa24.51■■□□□ 1.51
TARBP1-201ENST00000040877 SPATA2LQ8IUW3 424 aaPredicted RBP24.51■■□□□ 1.51
TARBP1-201ENST00000040877 EFHBQ8N7U6 833 aa24.51■■□□□ 1.51
TARBP1-201ENST00000040877 MOXD1Q6UVY6 613 aa24.51■■□□□ 1.51
TARBP1-201ENST00000040877 KBTBD13C9JR72 458 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 PDCD6IPQ8WUM4 868 aaKnown RBP24.5■■□□□ 1.51
TARBP1-201ENST00000040877 VPS11Q9H270 941 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 TMEM60Q9H2L4 133 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 MRFAP1Q9Y605 127 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 ZNF157P51786 506 aaPredicted RBP24.5■■□□□ 1.51
TARBP1-201ENST00000040877 STK4Q13043 487 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 PPM1NQ8N819 430 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 MUTP22033 750 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 PRAMEP78395 509 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 PDIA2Q13087 525 aaKnown RBP24.5■■□□□ 1.51
TARBP1-201ENST00000040877 E2F5Q15329 346 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 NOP9Q86U38 636 aaKnown RBP24.5■■□□□ 1.51
TARBP1-201ENST00000040877 PIDD1Q9HB75 910 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 MRPL40Q9NQ50 206 aaKnown RBP24.5■■□□□ 1.51
TARBP1-201ENST00000040877 TRIM33Q9UPN9 1127 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 C6orf222P0C671 652 aaPredicted RBP24.5■■□□□ 1.51
TARBP1-201ENST00000040877 MDM2Q00987 491 aaPredicted RBP24.5■■□□□ 1.51
TARBP1-201ENST00000040877 LAMC2Q13753 1193 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 IZUMO3Q5VZ72 239 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 EXT2Q93063 718 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 TMEM39BQ9GZU3 492 aa24.5■■□□□ 1.51
TARBP1-201ENST00000040877 SNX9Q9Y5X1 595 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms