RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Mrgprx1Q8CIP3 322 aa9.89□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Znf654Q9DAU9 571 aa9.89□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Xpo7Q9EPK7 1087 aa9.89□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Nid2O88322 1403 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Rhox12Q4TU81 186 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Flot2Q60634 428 aaKnown RBP9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Armcx2Q6A058 784 aaKnown RBP9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Stambpl1Q76N33 436 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Arhgap15Q811M1 481 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Kcns3Q8BQZ8 491 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 TwnkQ8CIW5 685 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 PdxkQ8K183 312 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Bbs7Q8K2G4 715 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Med21Q9CQ39 144 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Nudt12Q9DCN1 462 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 PalmdQ9JHU2 551 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Plekhg4A0A1L1SU27 1217 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Psma2P49722 234 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Szrd1Q6NXN1 152 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 SnphQ80U23 495 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Adgra1Q8C4G9 578 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Def8Q99J78 448 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Pabpc6Q9D4E6 643 aaKnown RBP9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 PudpQ9D5U5 234 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Tbk1Q9WUN2 729 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Knl1Q66JQ7 1612 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ttll10A4Q9F3 704 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Gm3424L7N298 263 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Gm3187M0QWW3 260 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Gm8246M0QWX9 263 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Dsg3O35902 993 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Klc1O88447 541 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 OatP29758 439 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ifnar1P33896 590 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Inpp1P49442 396 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Trim43cP86449 446 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Fam160a1Q505K2 1081 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ccdc85aQ5SP85 500 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Mmgt1Q8K273 131 aaKnown RBP9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Znrd1-asQ8R0E5 213 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Myoz2Q9JJW5 264 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Morc3F7BJB9 942 aaKnown RBP9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Aff1O88573 1216 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 FancbQ5XJY6 703 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Arhgap26Q6ZQ82 814 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ip6k2Q80V72 448 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 AdigQ8R400 80 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Pcdhgb4Q91XX6 912 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Polr3eQ9CZT4 710 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 NfkbizQ9EST8 728 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Cyp39a1Q9JKJ9 470 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Nrg3O35181 713 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 PpargP37238 505 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Atp4aQ64436 1033 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Tldc1Q8K0P3 455 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Hspbp1Q99P31 357 aaKnown RBP9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Rrp15Q9CYX7 281 aaKnown RBP9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ndc80Q9D0F1 642 aaKnown RBP9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 MrrfQ9D6S7 262 aaKnown RBP9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Tekt1Q9DAJ2 418 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Nek3Q9R0A5 511 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 PtprtQ99M80 1454 aa9.88□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Mocs3A2BDX3 460 aaKnown RBP9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Psmc5P62196 406 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Atp6v1b2P62814 511 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Tmed8Q3UHI4 326 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Rnf10Q3UIW5 804 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Oog4Q4G0C7 502 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Tnni3kQ5GIG6 834 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Lrrn2Q6PHP6 730 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Pum3Q8BKS9 647 aaKnown RBP9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 YwhabQ9CQV8 246 aaKnown RBP9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Rbp7Q9EPC5 134 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Extl3Q9WVL6 918 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Gm4871D3Z0W7 314 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Gm10134F6ZQC6 126 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 PRAG1Q571I4 1179 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 SpdyaQ5IBH7 310 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Rbbp7Q60973 425 aaKnown RBP9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Pde10aQ8CA95 790 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Doc2gQ9ESN1 387 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 CtsfQ9R013 462 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Atp10bB1AWN4 1474 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 L3mbtl1A2A5N8 826 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Fgd3O88842 733 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Mt-CybP00158 381 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 GalcP54818 684 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Mark2Q05512 776 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 InscQ3HNM7 579 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Atp13a5Q3TYU2 1216 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Usp13Q5BKP2 858 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 HiraQ61666 1015 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Olfml3Q8BK62 406 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Rps6kc1Q8BLK9 1056 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Fbxl5Q8C2S5 690 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Dppa3Q8QZY3 150 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ttc8Q8VD72 515 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Tbx18Q9EPZ6 613 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Pcdh11xF6ZNL5 1338 aa9.87□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 GakQ99KY4 1305 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms