RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Spire2Q8K1S6 718 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Gtf3c6Q9D8P7 227 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Rbp7Q9EPC5 134 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Prmt2Q9R144 448 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Tll2Q9WVM6 1012 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Sbf2E9PXF8 1872 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Zscan4-ps3A0A1B0GRH6 506 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Zscan4-ps2A0A1C7CYU6 506 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Pus7B7ZNL8 666 aaKnown RBP16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Cd70O55237 195 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Odr4Q4PJX1 447 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Mill1Q8HWE7 395 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Pitpnm1O35954 1243 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Art2aP17981 287 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Cst8P32766 142 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Fam207aP58468 219 aaKnown RBP16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Ntrk3Q6VNS1 825 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 AdigQ8R400 80 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Fkbp6Q91XW8 327 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Xpo6Q924Z6 1125 aa16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Zcchc8Q9CYA6 709 aaKnown RBP16.1■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 RptorQ8K4Q0 1335 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Tbc1d16A2ABG4 766 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Skint3A7TZF0 458 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Gm3182K7N6T8 263 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Vmn2r15L7N2A0 855 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Mt-CybP00158 381 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Rrm1P07742 792 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Hnrnph2P70333 449 aaKnown RBP16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Vps41Q5KU39 853 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Enoph1Q8BGB7 257 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Rccd1Q8BTU7 377 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 A430089I19RikQ8C9W1 407 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Actl9Q8CG27 415 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Rnf4Q9QZS2 194 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Zbtb17Q60821 794 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Lrrc42Q8R2U7 421 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Pcdha5Q91Y15 934 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Sf3a3Q9D554 501 aaKnown RBP16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Cacna1fQ9JIS7 1985 aa16.09■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 PatjQ63ZW7 1834 aa16.08■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Mia3Q8BI84 1930 aa16.08■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Mms22lB1AUR6 1238 aa16.08■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Hnrnph1O35737 449 aaKnown RBP16.08■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 P01734 135 aa16.08■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Siglec10Q80ZE3 688 aa16.08■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 L3mbtl3Q8BLB7 883 aa16.08■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Dnajc28Q8VCE1 385 aa16.08■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Tti1Q91V83 1085 aa16.08■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Tlr3Q99MB1 905 aa16.08■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Cacna2d3Q9Z1L5 1091 aa16.08■□□□□ 0.17
Nkx3-1-201ENSMUST00000022646 Klrk1O54709 232 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Rmdn3Q3UJU9 470 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Bpifb5Q3UQ05 490 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Syne3Q4FZC9 975 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Cyp2c67Q569X9 491 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Cnot7Q60809 285 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Tarsl2Q8BLY2 790 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Rsad2Q8CBB9 362 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 DaglbQ91WC9 669 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ankef1Q9D2J7 775 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Gys1Q9Z1E4 738 aaKnown RBP16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 6030498E09RikB1AX85 169 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Capn13Q3UW68 665 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ndfip2Q91ZP6 311 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Mcur1Q9CXD6 340 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Olig1Q9JKN5 260 aa16.08■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Fam92bQ3V2J0 292 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Gm11437Q5QR91 290 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Kbtbd3Q8BHI4 607 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Leg1Q8C6C9 337 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Gnl3Q8CI11 538 aaKnown RBP16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Trappc12Q8K2L8 797 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Tnpo2Q99LG2 887 aaKnown RBP16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Dnajc18Q9CZJ9 357 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ftsj3Q9DBE9 838 aaKnown RBP16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Gyg1Q9R062 333 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Klrc2Q9WTJ9 238 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Pgap3A2A559 320 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ccdc85cE9Q6B2 420 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Prdm15E9Q8T2 1174 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Msh2P43247 935 aaKnown RBP16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 UrosP51163 265 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Shox2P70390 331 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Daam2Q80U19 1115 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Tmem120aQ8C1E7 343 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Myef2Q8C854 591 aaKnown RBP16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Btbd6Q8K2J9 488 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Scrn2Q8VCA8 425 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Rhobtb2Q91V93 728 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 BrdtQ91Y44 956 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Polr3fQ921X6 316 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ccdc124Q9D8X2 217 aaKnown RBP16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 1700109H08RikQ9D9C0 210 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ggt5Q9Z2A9 573 aa16.07■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 PrkceP16054 737 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Bcat1P24288 386 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Spink5Q148R4 1017 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Fam193bQ3U2K0 892 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Tfap2bQ61313 459 aa16.06■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms