RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W PRR2Q12310 699 aa1.99□□□□□ -2.09
SHS1YDL225W MRX4Q12467 430 aa1.99□□□□□ -2.09
SHS1YDL225W YPR096CO13587 100 aa1.99□□□□□ -2.09
SHS1YDL225W RPP0P05317 312 aaKnown RBP1.99□□□□□ -2.09
SHS1YDL225W RIB7P33312 244 aa1.99□□□□□ -2.09
SHS1YDL225W SER33P40510 469 aa1.99□□□□□ -2.09
SHS1YDL225W RPE1P46969 238 aa1.99□□□□□ -2.09
SHS1YDL225W YGL088WP53151 121 aa1.99□□□□□ -2.09
SHS1YDL225W TRM44Q02648 567 aaKnown RBP1.99□□□□□ -2.09
SHS1YDL225W SDC1Q03323 175 aa1.99□□□□□ -2.09
SHS1YDL225W TIM22Q12328 207 aa1.99□□□□□ -2.09
SHS1YDL225W RRP36Q12481 300 aaPredicted RBP1.99□□□□□ -2.09
SHS1YDL225W MET2P08465 486 aa1.98□□□□□ -2.09
SHS1YDL225W MET16P18408 261 aaPredicted RBP1.98□□□□□ -2.09
SHS1YDL225W CAM1P29547 415 aaKnown RBP1.98□□□□□ -2.09
SHS1YDL225W ERG2P32352 222 aa1.98□□□□□ -2.09
SHS1YDL225W ALK2P32789 676 aaPredicted RBP1.98□□□□□ -2.09
SHS1YDL225W SPL2P38839 148 aa1.98□□□□□ -2.09
SHS1YDL225W RCY1P39531 840 aa1.98□□□□□ -2.09
SHS1YDL225W TAD2P47058 250 aa1.98□□□□□ -2.09
SHS1YDL225W KAP114P53067 1004 aa1.98□□□□□ -2.09
SHS1YDL225W ALG9P53868 555 aaKnown RBP1.98□□□□□ -2.09
SHS1YDL225W RLP24Q07915 199 aaKnown RBP1.98□□□□□ -2.09
SHS1YDL225W HRT1Q08273 121 aa1.98□□□□□ -2.09
SHS1YDL225W SSK22P25390 1331 aaPredicted RBP1.98□□□□□ -2.09
SHS1YDL225W RPL24AP04449 155 aaKnown RBP1.97□□□□□ -2.09
SHS1YDL225W RPL4AP10664 362 aaKnown RBP1.97□□□□□ -2.09
SHS1YDL225W PEX3P28795 441 aa1.97□□□□□ -2.09
SHS1YDL225W SDH4P37298 181 aa1.97□□□□□ -2.09
SHS1YDL225W PET100P38958 111 aa1.97□□□□□ -2.09
SHS1YDL225W SUR2P38992 349 aa1.97□□□□□ -2.09
SHS1YDL225W YER084WP40057 128 aa1.97□□□□□ -2.09
SHS1YDL225W SCC4P40090 624 aa1.97□□□□□ -2.09
SHS1YDL225W COA1P40452 197 aa1.97□□□□□ -2.09
SHS1YDL225W RPL4BP49626 362 aaKnown RBP1.97□□□□□ -2.09
SHS1YDL225W NBP35P52920 328 aa1.97□□□□□ -2.09
SHS1YDL225W MNT4P53745 580 aa1.97□□□□□ -2.09
SHS1YDL225W YDR114CQ04597 100 aa1.97□□□□□ -2.09
SHS1YDL225W YPL150WQ12152 901 aa1.97□□□□□ -2.09
SHS1YDL225W TDH2P00358 332 aaKnown RBP1.96□□□□□ -2.1
SHS1YDL225W MIG1P27705 504 aa1.96□□□□□ -2.1
SHS1YDL225W NPT1P39683 429 aaKnown RBP1.96□□□□□ -2.1
SHS1YDL225W TIM21P53220 239 aa1.96□□□□□ -2.1
SHS1YDL225W SWS2P53937 143 aa1.96□□□□□ -2.1
SHS1YDL225W DIA1P54005 336 aa1.96□□□□□ -2.1
SHS1YDL225W YPL039WQ03080 316 aa1.96□□□□□ -2.1
SHS1YDL225W CTR3Q06686 241 aa1.96□□□□□ -2.1
SHS1YDL225W YOS9Q99220 542 aa1.96□□□□□ -2.1
SHS1YDL225W HIS1P00498 297 aaKnown RBP1.96□□□□□ -2.1
SHS1YDL225W RSA4P25382 515 aaKnown RBP1.96□□□□□ -2.1
SHS1YDL225W CSG2P35206 410 aa1.96□□□□□ -2.1
SHS1YDL225W HMT1P38074 348 aa1.96□□□□□ -2.1
SHS1YDL225W YHI9P38765 294 aa1.96□□□□□ -2.1
SHS1YDL225W YJL118WP47022 219 aa1.96□□□□□ -2.1
SHS1YDL225W OST3P48439 350 aa1.96□□□□□ -2.1
SHS1YDL225W MPP6P53725 186 aaPredicted RBP1.96□□□□□ -2.1
SHS1YDL225W YNL095CP53932 642 aa1.96□□□□□ -2.1
SHS1YDL225W YBL112CQ3E7Y4 105 aa1.96□□□□□ -2.1
SHS1YDL225W COX2P00410 251 aa1.95□□□□□ -2.1
SHS1YDL225W HIS3P06633 220 aa1.95□□□□□ -2.1
SHS1YDL225W ZWF1P11412 505 aaKnown RBP1.95□□□□□ -2.1
SHS1YDL225W KRE1P17260 313 aa1.95□□□□□ -2.1
SHS1YDL225W CAB3P36076 571 aa1.95□□□□□ -2.1
SHS1YDL225W ARN2P38724 620 aa1.95□□□□□ -2.1
SHS1YDL225W SHC1P39000 512 aa1.95□□□□□ -2.1
SHS1YDL225W KAP95Q06142 861 aaKnown RBP1.95□□□□□ -2.1
SHS1YDL225W YOL019WQ08157 551 aa1.95□□□□□ -2.1
SHS1YDL225W SME1Q12330 94 aaPredicted RBP1.95□□□□□ -2.1
SHS1YDL225W AI5_BETAQ9ZZX0 354 aa1.95□□□□□ -2.1
SHS1YDL225W PAN1P32521 1480 aa1.95□□□□□ -2.1
SHS1YDL225W POL30P15873 258 aaKnown RBP1.94□□□□□ -2.1
SHS1YDL225W YHL049CP38722 271 aa1.94□□□□□ -2.1
SHS1YDL225W PRM9P39551 298 aa1.94□□□□□ -2.1
SHS1YDL225W DDI1P40087 428 aa1.94□□□□□ -2.1
SHS1YDL225W MAL13P53338 473 aa1.94□□□□□ -2.1
SHS1YDL225W ALG11P53954 548 aaKnown RBP1.94□□□□□ -2.1
SHS1YDL225W OST6Q03723 332 aa1.94□□□□□ -2.1
SHS1YDL225W COX20Q04935 205 aa1.94□□□□□ -2.1
SHS1YDL225W FEX1Q08913 375 aa1.94□□□□□ -2.1
SHS1YDL225W FEX2Q08991 375 aa1.94□□□□□ -2.1
SHS1YDL225W NUP157P40064 1391 aaKnown RBP1.93□□□□□ -2.1
SHS1YDL225W YEL009C-AA0A023PZF2 135 aa1.93□□□□□ -2.1
SHS1YDL225W HEK2P38199 381 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
SHS1YDL225W YAR1P46683 200 aa1.93□□□□□ -2.1
SHS1YDL225W YMR166CQ03829 368 aa1.93□□□□□ -2.1
SHS1YDL225W ISD11Q6Q560 94 aa1.93□□□□□ -2.1
SHS1YDL225W COS2P0CX12 379 aa1.93□□□□□ -2.1
SHS1YDL225W COS3P0CX13 379 aa1.93□□□□□ -2.1
SHS1YDL225W TOM40P23644 387 aaKnown RBP1.93□□□□□ -2.1
SHS1YDL225W YKR032WP36127 104 aa1.93□□□□□ -2.1
SHS1YDL225W YER188WP40103 239 aa1.93□□□□□ -2.1
SHS1YDL225W RPL10P41805 221 aaKnown RBP1.93□□□□□ -2.1
SHS1YDL225W PIR5P46999 287 aa1.93□□□□□ -2.1
SHS1YDL225W YJR012CP47087 207 aa1.93□□□□□ -2.1
SHS1YDL225W ATC1Q04005 294 aa1.93□□□□□ -2.1
SHS1YDL225W CLP1Q08685 445 aaPredicted RBP1.93□□□□□ -2.1
SHS1YDL225W STH1P32597 1359 aa1.92□□□□□ -2.1
SHS1YDL225W MRP1P10662 321 aaKnown RBP1.92□□□□□ -2.1
SHS1YDL225W DAL82P21705 255 aa1.92□□□□□ -2.1
SHS1YDL225W NBP1P52919 319 aaPredicted RBP1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms