RNA–Protein interactions for RNA: ENST00000641548.1

PPT1-216, Transcript of palmitoyl-protein thioesterase 1, human

Gene PPT1, Length 507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPT1-216	ENST00000641548	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	GLYCTK	Q8IVS8	523 aa		13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	ZNF713	Q8N859	430 aa	Predicted RBP	13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	ZNF274	Q96GC6	653 aa	Predicted RBP	13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	FAM193B	Q96PV7	902 aa	Predicted RBP	13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	KXD1	Q9BQD3	176 aa		13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	TMEM175	Q9BSA9	504 aa		13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	TRAIP	Q9BWF2	469 aa		13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	ANO3	Q9BYT9	981 aa		13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	RXFP1	Q9HBX9	757 aa		13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	FAM105A	Q9NUU6	356 aa		13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	PIN4	Q9Y237	131 aa	Known RBP	13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	GCN1	Q92616	2671 aa	Known RBP	13.62	□□□□□ -0.23
PPT1-216	ENST00000641548	FOXD2	O60548	495 aa	Predicted RBP	13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	CLK2	P49760	499 aa	Known RBP	13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	AFF1	P51825	1210 aa	Known RBP	13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	ANAPC15	P60006	121 aa		13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	NTHL1	P78549	312 aa		13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	ADCY1	Q08828	1119 aa		13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	KDF1	Q8NAX2	398 aa	Predicted RBP	13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	FGF13	Q92913	245 aa		13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	PHF20	Q9BVI0	1012 aa		13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	RNF26	Q9BY78	433 aa	Predicted RBP	13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	MARCH5	Q9NX47	278 aa		13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	VPS54	Q9P1Q0	977 aa		13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	TPCN1	Q9ULQ1	816 aa		13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	MRPS17	Q9Y2R5	130 aa	Known RBP	13.61	□□□□□ -0.23
PPT1-216	ENST00000641548	FLNB	O75369	2602 aa	Known RBP	13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	MEIS1	O00470	390 aa		13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	TM4SF5	O14894	197 aa		13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	FOS	P01100	380 aa	Predicted RBP	13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	NCL	P19338	710 aa	Known RBP	13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	RAB27A	P51159	221 aa		13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	LIMK1	P53667	647 aa		13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	SSRP1	Q08945	709 aa	Known RBP	13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	LRSAM1	Q6UWE0	723 aa		13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	PGBD4	Q96DM1	585 aa		13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	CHRD	Q9H2X0	955 aa		13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	C6orf50	Q9HD87	102 aa		13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	HEBP1	Q9NRV9	189 aa		13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	NDRG2	Q9UN36	371 aa	Known RBP	13.6	□□□□□ -0.23
PPT1-216	ENST00000641548	SHISA7	A6NL88	538 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	CPLX1	O14810	134 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	DHX15	O43143	795 aa	Known RBP	13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	HR	O43593	1189 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	ZNF623	O75123	536 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	ZMYND10	O75800	440 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	POMC	P01189	267 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	SFPQ	P23246	707 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	OR1G1	P47890	313 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	DSG1	Q02413	1049 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	SCRN1	Q12765	414 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	SRSF5	Q13243	272 aa	Known RBP	13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	SF3A2	Q15428	464 aa	Known RBP	13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	AGMO	Q6ZNB7	445 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	RNF168	Q8IYW5	571 aa	Predicted RBP	13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	FAM167A	Q96KS9	214 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	AIFM3	Q96NN9	605 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	ZMYND12	Q9H0C1	365 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	GLT8D2	Q9H1C3	349 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	SLK	Q9H2G2	1235 aa	Predicted RBP	13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	GABBR1	Q9UBS5	961 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	LHX6	Q9UPM6	363 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	SPAG17	Q6Q759	2223 aa		13.59	□□□□□ -0.23
PPT1-216	ENST00000641548	ESYT2	A0FGR8	921 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	SRRM3	A6NNA2	597 aa	Predicted RBP	13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	KCNK5	O95279	499 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	ZNF76	P36508	570 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	CCR3	P51677	355 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	RING1	Q06587	406 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	AP3B2	Q13367	1082 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	DRP2	Q13474	957 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	C8orf34	Q49A92	452 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	LILRA6	Q6PI73	481 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	TRIM22	Q8IYM9	498 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	C12orf50	Q8NA57	414 aa	Predicted RBP	13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	ITFG1	Q8TB96	612 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	B3GALT6	Q96L58	329 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	RSAD1	Q9HA92	442 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	RXFP3	Q9NSD7	469 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	KANSL3	Q9P2N6	904 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	TCEAL9	Q9UHQ7	104 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	PCDHB2	Q9Y5E7	798 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	AKAP13	Q12802	2813 aa		13.58	□□□□□ -0.24
PPT1-216	ENST00000641548	NOTCH4	Q99466	2003 aa		13.57	□□□□□ -0.24
PPT1-216	ENST00000641548		A0A087WZ62	844 aa		13.57	□□□□□ -0.24
PPT1-216	ENST00000641548	CHURC1-FNTB	B4DL54	471 aa		13.57	□□□□□ -0.24
PPT1-216	ENST00000641548		F8W810	466 aa		13.57	□□□□□ -0.24
PPT1-216	ENST00000641548	IPO5	O00410	1097 aa	Known RBP	13.57	□□□□□ -0.24
PPT1-216	ENST00000641548	EIF5B	O60841	1220 aa	Known RBP	13.57	□□□□□ -0.24
PPT1-216	ENST00000641548	EFEMP2	O95967	443 aa		13.57	□□□□□ -0.24
PPT1-216	ENST00000641548	C1R	P00736	705 aa		13.57	□□□□□ -0.24
PPT1-216	ENST00000641548	PSAP	P07602	524 aa		13.57	□□□□□ -0.24
PPT1-216	ENST00000641548	RPL17	P18621	184 aa	Known RBP	13.57	□□□□□ -0.24
PPT1-216	ENST00000641548	GNA11	P29992	359 aa		13.57	□□□□□ -0.24
PPT1-216	ENST00000641548	SREBF1	P36956	1147 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms