RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 TRAPPC3LQ5T215 181 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 GSPT2Q8IYD1 628 aaKnown RBP8.76□□□□□ -1.01
NECAP1-227ENST00000640648 MB21D1Q8N884 522 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 TTC16Q8NEE8 873 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 B3GALT6Q96L58 329 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 PNKPQ96T60 521 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 MMTAG2Q9BU76 263 aaKnown RBP8.76□□□□□ -1.01
NECAP1-227ENST00000640648 TIPINQ9BVW5 301 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 IFT122Q9HBG6 1241 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 TMEM165Q9HC07 324 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 CCNL1Q9UK58 526 aaPredicted RBP8.76□□□□□ -1.01
NECAP1-227ENST00000640648 TRIM49BA6NDI0 452 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 POTECB2RU33 542 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 PIK3CDO00329 1044 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 EIF4A3P38919 411 aaKnown RBP8.76□□□□□ -1.01
NECAP1-227ENST00000640648 GARSP41250 739 aaKnown RBP8.76□□□□□ -1.01
NECAP1-227ENST00000640648 ZNF268Q14587 947 aaPredicted RBP8.76□□□□□ -1.01
NECAP1-227ENST00000640648 SNX30Q5VWJ9 437 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 GALNT17Q6IS24 598 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 AAGABQ6PD74 315 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 PCGF5Q86SE9 256 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 RHOT2Q8IXI1 618 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 STRBPQ96SI9 672 aaKnown RBP8.76□□□□□ -1.01
NECAP1-227ENST00000640648 RHOBTB2Q9BYZ6 727 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 TUBE1Q9UJT0 475 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 CAPN11Q9UMQ6 739 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 AK5Q9Y6K8 562 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 NLRP1Q9C000 1473 aa8.76□□□□□ -1.01
NECAP1-227ENST00000640648 SSU72P8A0A1W2PR75 194 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 H7C1W4 665 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 STX7O15400 261 aaKnown RBP8.75□□□□□ -1.01
NECAP1-227ENST00000640648 BRAFP15056 766 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 ZFP1Q6P2D0 407 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 CPXCR1Q8N123 301 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 RIN3Q8TB24 985 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 HPS1Q92902 700 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 LIMA1Q9UHB6 759 aaKnown RBP8.75□□□□□ -1.01
NECAP1-227ENST00000640648 NEDD4P46934 1319 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 NBPF26B4DH59 902 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 CAPN9O14815 690 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 ADCY8P40145 1251 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 RFC5P40937 340 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 RAP1GAPP47736 663 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 EPS8Q12929 822 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 RNF43Q68DV7 783 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 LRRC74BQ6ZQY2 392 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 RGS9BPQ6ZS82 235 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 NLRP10Q86W26 655 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 PSTPIP2Q9H939 334 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 PLK2Q9NYY3 685 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 ABCA6Q8N139 1617 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 AK9Q5TCS8 1911 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 A0A1W2PQJ5 194 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 SNTNA6NMZ2 147 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 CFAP99D6REC4 459 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 IRF6O14896 467 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 KIF11P52732 1056 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 GTF2IP78347 998 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 MAP3K10Q02779 954 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 TTLL12Q14166 644 aaPredicted RBP8.75□□□□□ -1.01
NECAP1-227ENST00000640648 RWDD4Q6NW29 188 aaKnown RBP8.75□□□□□ -1.01
NECAP1-227ENST00000640648 TRIM65Q6PJ69 517 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 SHC4Q6S5L8 630 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 CAPN12Q6ZSI9 719 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 GET4Q7L5D6 327 aaPredicted RBP8.75□□□□□ -1.01
NECAP1-227ENST00000640648 TTC39CQ8N584 583 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 LSM14AQ8ND56 463 aaKnown RBP8.75□□□□□ -1.01
NECAP1-227ENST00000640648 LARP4BQ92615 738 aaKnown RBP8.75□□□□□ -1.01
NECAP1-227ENST00000640648 PTPRN2Q92932 1015 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 TMEM237Q96Q45 408 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 GLT8D2Q9H1C3 349 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.01
NECAP1-227ENST00000640648 COPG2Q9UBF2 871 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 KIAA1024Q9UPX6 916 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 UNC13BO14795 1591 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 GOLGA8MH3BSY2 632 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 ZBED4O75132 1171 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 FAM58BPP0C7Q3 252 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 VAV1P15498 845 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 CA4P22748 312 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 TCP11X2Q5H9J9 407 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 WDR44Q5JSH3 913 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 DPP8Q6V1X1 898 aaPredicted RBP8.75□□□□□ -1.01
NECAP1-227ENST00000640648 PACS1Q6VY07 963 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 AGAP11Q8TF27 550 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 APBB2Q92870 758 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 DACH2Q96NX9 599 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 APOL4Q9BPW4 351 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 OSBPL10Q9BXB5 764 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 RABL2BQ9UNT1 228 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 AGTPBP1Q9UPW5 1226 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 WDR19Q8NEZ3 1342 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 LAMC1P11047 1609 aa8.75□□□□□ -1.01
NECAP1-227ENST00000640648 PRPF3O43395 683 aaKnown RBP8.74□□□□□ -1.01
NECAP1-227ENST00000640648 PLTPP55058 493 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 ARMC3Q5W041 872 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 C16orf89Q6UX73 402 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 MB21D2Q8IYB1 491 aaPredicted RBP8.74□□□□□ -1.01
NECAP1-227ENST00000640648 TCAIMQ8N3R3 496 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms