RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	TBX20	Q9UMR3	447 aa		29.32	■■■□□ 2.28
VEGFA-231	ENST00000640499	GIT1	Q9Y2X7	761 aa		29.32	■■■□□ 2.28
VEGFA-231	ENST00000640499	LAG3	P18627	525 aa		29.31	■■■□□ 2.28
VEGFA-231	ENST00000640499	MLH1	P40692	756 aa		29.31	■■■□□ 2.28
VEGFA-231	ENST00000640499	GTF2B	Q00403	316 aa		29.31	■■■□□ 2.28
VEGFA-231	ENST00000640499	TMEM132A	Q24JP5	1023 aa		29.31	■■■□□ 2.28
VEGFA-231	ENST00000640499	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	29.31	■■■□□ 2.28
VEGFA-231	ENST00000640499	KCNT2	Q6UVM3	1135 aa		29.31	■■■□□ 2.28
VEGFA-231	ENST00000640499	FAM178B	Q8IXR5	827 aa		29.31	■■■□□ 2.28
VEGFA-231	ENST00000640499	MRPL9	Q9BYD2	267 aa	Known RBP	29.31	■■■□□ 2.28
VEGFA-231	ENST00000640499	FGFBP2	Q9BYJ0	223 aa		29.31	■■■□□ 2.28
VEGFA-231	ENST00000640499	TRIM9	Q9C026	710 aa		29.31	■■■□□ 2.28
VEGFA-231	ENST00000640499	UBN1	Q9NPG3	1134 aa		29.31	■■■□□ 2.28
VEGFA-231	ENST00000640499	DNAJB4	Q9UDY4	337 aa		29.31	■■■□□ 2.28
VEGFA-231	ENST00000640499	MYO7A	Q13402	2215 aa		29.3	■■■□□ 2.28
VEGFA-231	ENST00000640499		K7ENM7	598 aa		29.3	■■■□□ 2.28
VEGFA-231	ENST00000640499	ACTN4	O43707	911 aa	Known RBP	29.3	■■■□□ 2.28
VEGFA-231	ENST00000640499	PPP1R37	O75864	691 aa		29.3	■■■□□ 2.28
VEGFA-231	ENST00000640499	POMC	P01189	267 aa		29.3	■■■□□ 2.28
VEGFA-231	ENST00000640499	CASP1	P29466	404 aa		29.3	■■■□□ 2.28
VEGFA-231	ENST00000640499	CNNM4	Q6P4Q7	775 aa		29.3	■■■□□ 2.28
VEGFA-231	ENST00000640499	ZNF720	Q7Z2F6	126 aa		29.3	■■■□□ 2.28
VEGFA-231	ENST00000640499	CEP120	Q8N960	986 aa		29.3	■■■□□ 2.28
VEGFA-231	ENST00000640499	RSPH1	Q8WYR4	309 aa		29.3	■■■□□ 2.28
VEGFA-231	ENST00000640499	ST6GALNAC4	Q9H4F1	302 aa		29.3	■■■□□ 2.28
VEGFA-231	ENST00000640499	SERTAD1	Q9UHV2	236 aa		29.3	■■■□□ 2.28
VEGFA-231	ENST00000640499	CIZ1	Q9ULV3	898 aa	Predicted RBP	29.3	■■■□□ 2.28
VEGFA-231	ENST00000640499	BCAR1	P56945	870 aa		29.29	■■■□□ 2.28
VEGFA-231	ENST00000640499	STRN3	Q13033	797 aa		29.29	■■■□□ 2.28
VEGFA-231	ENST00000640499	CCDC85B	Q15834	202 aa	Predicted RBP	29.29	■■■□□ 2.28
VEGFA-231	ENST00000640499	DCAF4L1	Q3SXM0	396 aa		29.29	■■■□□ 2.28
VEGFA-231	ENST00000640499	MRPL38	Q96DV4	380 aa	Known RBP	29.29	■■■□□ 2.28
VEGFA-231	ENST00000640499	C7orf25	Q9BPX7	421 aa		29.29	■■■□□ 2.28
VEGFA-231	ENST00000640499	IKZF4	Q9H2S9	585 aa		29.29	■■■□□ 2.28
VEGFA-231	ENST00000640499	GOLPH3L	Q9H4A5	285 aa		29.29	■■■□□ 2.28
VEGFA-231	ENST00000640499	TBC1D7	Q9P0N9	293 aa		29.29	■■■□□ 2.28
VEGFA-231	ENST00000640499	PARP2	Q9UGN5	583 aa		29.29	■■■□□ 2.28
VEGFA-231	ENST00000640499	PCDHB12	Q9Y5F1	795 aa		29.29	■■■□□ 2.28
VEGFA-231	ENST00000640499		A0A1W2PQ27	194 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499		A0A1W2PQ64	194 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499		A0A1W2PQD8	194 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499		H0YCG3	227 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	MEFV	O15553	781 aa	Predicted RBP	29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	GTPBP6	O43824	516 aa	Predicted RBP	29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	IDE	P14735	1019 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	ANP32A	P39687	249 aa	Known RBP	29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	SCNN1G	P51170	649 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	CASP5	P51878	434 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	NDUFA8	P51970	172 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	SLC39A4	Q6P5W5	647 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	ZPBP2	Q6X784	338 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	ZBTB33	Q86T24	672 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	TMEM173	Q86WV6	379 aa	Predicted RBP	29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	GRAMD1C	Q8IYS0	662 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	SLC39A11	Q8N1S5	342 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	ADPGK	Q9BRR6	497 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	AAAS	Q9NRG9	546 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	PANK4	Q9NVE7	773 aa		29.28	■■■□□ 2.28
VEGFA-231	ENST00000640499	NT5C1B-RDH14	C9J2C7	533 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	FGF18	O76093	207 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	RECQL4	O94761	1208 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	PIGR	P01833	764 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	GALT	P07902	379 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	GAP43	P17677	238 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	MPZL3	Q6UWV2	235 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	URGCP	Q8TCY9	931 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	BCL7C	Q8WUZ0	217 aa	Predicted RBP	29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	POF1B	Q8WVV4	589 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	PPM1E	Q8WY54	764 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	HPS3	Q969F9	1004 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	ZNF558	Q96NG5	402 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	KANSL3	Q9P2N6	904 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	GDA	Q9Y2T3	454 aa		29.27	■■■□□ 2.28
VEGFA-231	ENST00000640499	PTGES	O14684	152 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	TOM1L1	O75674	476 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	SLFN14	P0C7P3	912 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	MCF2	P10911	925 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	SLC11A1	P49279	550 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	DSC1	Q08554	894 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	KCNA1	Q09470	495 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	ZNF568	Q3ZCX4	644 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	TPRN	Q4KMQ1	711 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	HERC4	Q5GLZ8	1057 aa	Predicted RBP	29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	COLGALT2	Q8IYK4	626 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	HACE1	Q8IYU2	909 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	MICALL1	Q8N3F8	863 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	GBP3	Q9H0R5	595 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	BLZF1	Q9H2G9	400 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	MAGEF1	Q9HAY2	307 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	OLFML3	Q9NRN5	406 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	SEL1L	Q9UBV2	794 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	ZMYM2	Q9UBW7	1377 aa		29.26	■■■□□ 2.27
VEGFA-231	ENST00000640499	TRIP11	Q15643	1979 aa		29.25	■■■□□ 2.27
VEGFA-231	ENST00000640499	ZC3H11A	O75152	810 aa	Known RBP eCLIP	29.25	■■■□□ 2.27
VEGFA-231	ENST00000640499	SCP2	P22307	547 aa		29.25	■■■□□ 2.27
VEGFA-231	ENST00000640499	IRS1	P35568	1242 aa		29.25	■■■□□ 2.27
VEGFA-231	ENST00000640499	GRM5	P41594	1212 aa		29.25	■■■□□ 2.27
VEGFA-231	ENST00000640499	PLCB3	Q01970	1234 aa		29.25	■■■□□ 2.27
VEGFA-231	ENST00000640499	RNASEL	Q05823	741 aa	Known RBP	29.25	■■■□□ 2.27
VEGFA-231	ENST00000640499	COASY	Q13057	564 aa		29.25	■■■□□ 2.27

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