RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 PCDHA5Q9Y5H7 936 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 SLC4A4Q9Y6R1 1079 aa6.99□□□□□ -1.29
ATM-229ENST00000639953 MYH8P13535 1937 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 SYCE3A1L190 88 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 VPS37CA5D8V6 355 aaPredicted RBP6.98□□□□□ -1.29
ATM-229ENST00000639953 ADAMTS3O15072 1205 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 FIBPO43427 364 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 PRC1O43663 620 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 BUB1BO60566 1050 aaPredicted RBP6.98□□□□□ -1.29
ATM-229ENST00000639953 ZFYP08048 801 aaPredicted RBP6.98□□□□□ -1.29
ATM-229ENST00000639953 ZNF16P17020 682 aaPredicted RBP6.98□□□□□ -1.29
ATM-229ENST00000639953 RXRAP19793 462 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 MAP2K2P36507 400 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 PMS1P54277 932 aaKnown RBP6.98□□□□□ -1.29
ATM-229ENST00000639953 EVCP57679 992 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 CBX2Q14781 532 aaPredicted RBP6.98□□□□□ -1.29
ATM-229ENST00000639953 SKOR2Q2VWA4 1001 aaPredicted RBP6.98□□□□□ -1.29
ATM-229ENST00000639953 ANKRD39Q53RE8 183 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 FBXW10Q5XX13 1052 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 LARP1BQ659C4 914 aaKnown RBP6.98□□□□□ -1.29
ATM-229ENST00000639953 CTR9Q6PD62 1173 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 TMED8Q6PL24 325 aaPredicted RBP6.98□□□□□ -1.29
ATM-229ENST00000639953 CERS3Q8IU89 383 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 CRACR2BQ8N4Y2 399 aaPredicted RBP6.98□□□□□ -1.29
ATM-229ENST00000639953 SYT8Q8NBV8 401 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 IGDCC4Q8TDY8 1250 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 DHX36Q9H2U1 1008 aaKnown RBP6.98□□□□□ -1.29
ATM-229ENST00000639953 PRR13Q9NZ81 148 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 PI4KBQ9UBF8 816 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 HCFC2Q9Y5Z7 792 aa6.98□□□□□ -1.29
ATM-229ENST00000639953 PTPDC1A2A3K4 754 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 B4E1Z4 1266 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 KIF28PB7ZC32 967 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 APPP05067 770 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 HLA-DOAP06340 250 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 ZNF76P36508 570 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 MAP2K1Q02750 393 aaPredicted RBP6.97□□□□□ -1.29
ATM-229ENST00000639953 ALX1Q15699 326 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 NOL9Q5SY16 702 aaKnown RBP6.97□□□□□ -1.29
ATM-229ENST00000639953 OLFML2BQ68BL8 750 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 UNC5AQ6ZN44 842 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 SCYL3Q8IZE3 742 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 IFNL3Q8IZI9 196 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 NAT16Q8N8M0 369 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 SLC44A5Q8NCS7 719 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 PWWP2AQ96N64 755 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 PTPN18Q99952 460 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 FUCA2Q9BTY2 467 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 MYL10Q9BUA6 226 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 GP6Q9HCN6 339 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 ATP8A2Q9NTI2 1148 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 HERC5Q9UII4 1024 aaKnown RBP6.97□□□□□ -1.29
ATM-229ENST00000639953 PPT2Q9UMR5 302 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 ZNF451Q9Y4E5 1061 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 PTPRFP10586 1907 aa6.97□□□□□ -1.29
ATM-229ENST00000639953 A0A087WWV3 80 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 A0A1W2PQ27 194 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 A0A1W2PQ64 194 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 A0A1W2PQC6 194 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 A0A1W2PQD8 194 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 UNCXA6NJT0 531 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 SH2B2O14492 632 aaPredicted RBP6.96□□□□□ -1.3
ATM-229ENST00000639953 RANBP6O60518 1105 aaKnown RBP6.96□□□□□ -1.3
ATM-229ENST00000639953 CTNND1O60716 968 aaKnown RBP6.96□□□□□ -1.3
ATM-229ENST00000639953 TBC1D8O95759 1140 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 ZBTB48P10074 688 aaPredicted RBP6.96□□□□□ -1.3
ATM-229ENST00000639953 CD247P20963 164 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 ENDOUP21128 410 aaKnown RBP6.96□□□□□ -1.3
ATM-229ENST00000639953 SHMT1P34896 483 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 TM4SF4P48230 202 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 TDO2P48775 406 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 RACK1P63244 317 aaKnown RBP6.96□□□□□ -1.3
ATM-229ENST00000639953 KRT32Q14532 448 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 C12orf60Q5U649 245 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 HLA-DQA1Q5Y7H0 255 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 CWF19L1Q69YN2 538 aaKnown RBP6.96□□□□□ -1.3
ATM-229ENST00000639953 METTL16Q86W50 562 aaKnown RBP6.96□□□□□ -1.3
ATM-229ENST00000639953 ERO1BQ86YB8 467 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 FOXP4Q8IVH2 680 aaPredicted RBP6.96□□□□□ -1.3
ATM-229ENST00000639953 HOMEZQ8IX15 550 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 BRI3BPQ8WY22 251 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 FCRL3Q96P31 734 aaPredicted RBP6.96□□□□□ -1.3
ATM-229ENST00000639953 FERD3LQ96RJ6 166 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 R3HDMLQ9H3Y0 253 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 RNF186Q9NXI6 227 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 SERPINB13Q9UIV8 391 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.96□□□□□ -1.3
ATM-229ENST00000639953 ZHX2Q9Y6X8 837 aa6.96□□□□□ -1.3
ATM-229ENST00000639953 CCL15-CCL14A0A0B4J2E2 113 aa6.95□□□□□ -1.3
ATM-229ENST00000639953 KLF18A0A0U1RQI7 1052 aa6.95□□□□□ -1.3
ATM-229ENST00000639953 MANSC4A6NHS7 340 aaPredicted RBP6.95□□□□□ -1.3
ATM-229ENST00000639953 TRIM75PA6NK02 468 aa6.95□□□□□ -1.3
ATM-229ENST00000639953 GH2P01242 217 aa6.95□□□□□ -1.3
ATM-229ENST00000639953 HSPA8P11142 646 aaKnown RBP6.95□□□□□ -1.3
ATM-229ENST00000639953 GNAT2P19087 354 aa6.95□□□□□ -1.3
ATM-229ENST00000639953 GUCY1A2P33402 732 aa6.95□□□□□ -1.3
ATM-229ENST00000639953 MRE11P49959 708 aa6.95□□□□□ -1.3
ATM-229ENST00000639953 GTF2A2P52657 109 aa6.95□□□□□ -1.3
ATM-229ENST00000639953 LBX1P52954 281 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms