RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 NECAB2Q7Z6G3 386 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 NOP9Q86U38 636 aaKnown RBP0.51□□□□□ -2.33
CCDC7-215ENST00000639629 ZDHHC12Q96GR4 267 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 ELF4Q99607 663 aaPredicted RBP0.51□□□□□ -2.33
CCDC7-215ENST00000639629 DSCC1Q9BVC3 393 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 GZF1Q9H116 711 aaPredicted RBP0.51□□□□□ -2.33
CCDC7-215ENST00000639629 XPNPEP3Q9NQH7 507 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 ETAA1Q9NY74 926 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 FBXL21Q9UKT6 434 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 PCDHB10Q9UN67 800 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 B2RBV5 119 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 NT5C1B-RDH14C9J2C7 533 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 NTN3O00634 580 aaPredicted RBP0.51□□□□□ -2.33
CCDC7-215ENST00000639629 NRP1O14786 923 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 FSBPO95073 299 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 SFPQP23246 707 aaKnown RBP eCLIP0.51□□□□□ -2.33
CCDC7-215ENST00000639629 DAZAP2Q15038 168 aaPredicted RBP0.51□□□□□ -2.33
CCDC7-215ENST00000639629 HS1BP3Q53T59 392 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 FAM209AQ5JX71 171 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 MCTP2Q6DN12 878 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 GRAMD4Q6IC98 578 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 GLB1LQ6UWU2 654 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 ARHGAP36Q6ZRI8 547 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 PTF1AQ7RTS3 328 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 MSL3Q8N5Y2 521 aaKnown RBP0.51□□□□□ -2.33
CCDC7-215ENST00000639629 DDX55Q8NHQ9 600 aaKnown RBP eCLIP0.51□□□□□ -2.33
CCDC7-215ENST00000639629 TMC1Q8TDI8 760 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 FGD4Q96M96 766 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 SERHL2Q9H4I8 314 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 SIDT1Q9NXL6 827 aaKnown RBP0.51□□□□□ -2.33
CCDC7-215ENST00000639629 CLDND1Q9NY35 253 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 SAE1Q9UBE0 346 aaPredicted RBP0.51□□□□□ -2.33
CCDC7-215ENST00000639629 FBXL17Q9UF56 701 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 GIT1Q9Y2X7 761 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 TNXBP22105 4242 aa0.51□□□□□ -2.33
CCDC7-215ENST00000639629 TCF20Q9UGU0 1960 aaKnown RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 ENO4A6NNW6 628 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 KCNQ3O43525 872 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 MYO1BO43795 1136 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 HOXC13P31276 330 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 MRE11P49959 708 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 KCNQ1P51787 676 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 WNT3P56703 355 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 TDRD10Q5VZ19 366 aaKnown RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 FRMD7Q6ZUT3 714 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 GRASPQ7Z6J2 395 aaPredicted RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 FGD2Q7Z6J4 655 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 CABP7Q86V35 215 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 PLXDC1Q8IUK5 500 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 LMF1Q96S06 567 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 HIRIP3Q9BW71 556 aaPredicted RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 ARHGAP20Q9P2F6 1191 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 SLC12A8A0AV02 714 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 DRGXA6NNA5 263 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 B5MCH6 92 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 TLX3O43711 291 aaPredicted RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 GLRX3O76003 335 aaKnown RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 PDE6AP16499 860 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 TNFRSF1BP20333 461 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 CD40P25942 277 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 MC4RP32245 332 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 PTGS2P35354 604 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 MAN2A2P49641 1150 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 SCNN1BP51168 640 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 CTXN1P60606 82 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 NKX6-1P78426 367 aaPredicted RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 PUM1Q14671 1186 aaKnown RBP eCLIP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 SEPT7Q16181 437 aaKnown RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 TMEM63BQ5T3F8 832 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 MBNL2Q5VZF2 373 aaKnown RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 B3GNT9Q6UX72 402 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 CD300LDQ6UXZ3 194 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 GPR149Q86SP6 731 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 SIRT2Q8IXJ6 389 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 GLB1L3Q8NCI6 653 aaPredicted RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 SLC25A43Q8WUT9 341 aaPredicted RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 HNRNPLLQ8WVV9 542 aaKnown RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 RAX2Q96IS3 184 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 UROC1Q96N76 676 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 MRS2Q9HD23 443 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 SLC23A1Q9UHI7 598 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 SPEF1Q9Y4P9 236 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 PCDHGB7Q9Y5F8 929 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 SPATA31A5Q5VU36 1347 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 SPATA31A6Q5VVP1 1343 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 SPATA31A7Q8IWB4 1347 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 CCDC78A2IDD5 438 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 NOP56O00567 594 aaKnown RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 PHF2O75151 1096 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 CTSSP25774 331 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 IL12RB1P42701 662 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 TNNI2P48788 182 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 FAM189BP81408 668 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 MAP3K12Q12852 859 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 MUM1Q2TAK8 710 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 KRTAP24-1Q3LI83 254 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 ZNF662Q6ZS27 426 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 OSTM1Q86WC4 334 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 JAMLQ86YT9 394 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 DCBLD1Q8N8Z6 715 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms