RNA–Protein interactions for RNA: ENST00000638914.1

PAX6-245, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 7,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-245ENST00000638914 PARVAQ9NVD7 372 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 SLC26A2P50443 739 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 MTFR1Q15390 333 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 WDR75Q8IWA0 830 aaKnown RBP12.46□□□□□ -0.41
PAX6-245ENST00000638914 MFN1Q8IWA4 741 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 LINC00116Q8NCU8 138 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 SCFD1Q8WVM8 642 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 TRIM15Q9C019 465 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 DHX35Q9H5Z1 703 aaKnown RBP12.46□□□□□ -0.41
PAX6-245ENST00000638914 LY9Q9HBG7 655 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 STARD7Q9NQZ5 370 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 SNX9Q9Y5X1 595 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 IQSEC2Q5JU85 1478 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 TOM1L1O75674 476 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 SAMD7Q7Z3H4 446 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 WHAMMQ8TF30 809 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 SKA1Q96BD8 255 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 C18orf8Q96DM3 657 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 PANX2Q96RD6 677 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 URODP06132 367 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 TPI1P60174 286 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 CUL1Q13616 776 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 NCOA3Q9Y6Q9 1424 aa12.46□□□□□ -0.41
PAX6-245ENST00000638914 UBE2Q2LH0YL09 131 aa12.46□□□□□ -0.42
PAX6-245ENST00000638914 DACT3Q96B18 629 aaPredicted RBP12.46□□□□□ -0.42
PAX6-245ENST00000638914 SPDL1Q96EA4 605 aa12.46□□□□□ -0.42
PAX6-245ENST00000638914 ANKEF1Q9NU02 776 aa12.46□□□□□ -0.42
PAX6-245ENST00000638914 RNF17Q9BXT8 1623 aaKnown RBP12.46□□□□□ -0.42
PAX6-245ENST00000638914 CXCL11O14625 94 aa12.46□□□□□ -0.42
PAX6-245ENST00000638914 DR1Q01658 176 aa12.46□□□□□ -0.42
PAX6-245ENST00000638914 RHOT1Q8IXI2 618 aa12.46□□□□□ -0.42
PAX6-245ENST00000638914 UHMK1Q8TAS1 419 aaKnown RBP12.46□□□□□ -0.42
PAX6-245ENST00000638914 SOCS4Q8WXH5 440 aa12.46□□□□□ -0.42
PAX6-245ENST00000638914 CFAP36Q96G28 342 aa12.46□□□□□ -0.42
PAX6-245ENST00000638914 C11orf70Q9BRQ4 267 aa12.46□□□□□ -0.42
PAX6-245ENST00000638914 CNOT10Q9H9A5 744 aaKnown RBP12.46□□□□□ -0.42
PAX6-245ENST00000638914 E9PMD0 336 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 ZW10O43264 779 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 IL1RL1Q01638 556 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 RABL6Q3YEC7 729 aaPredicted RBP12.45□□□□□ -0.42
PAX6-245ENST00000638914 TBC1D10CQ8IV04 446 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 CD302Q8IX05 232 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 SEPT5Q99719 369 aaPredicted RBP12.45□□□□□ -0.42
PAX6-245ENST00000638914 PLEKHA5Q9HAU0 1116 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 PCDHA13Q9Y5I0 950 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 STRNO43815 780 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 NBPF10Q6P3W6 841 aaKnown RBP12.45□□□□□ -0.42
PAX6-245ENST00000638914 C16orf86Q6ZW13 317 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 NBPF15Q8N660 670 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 GDAP1L1Q96MZ0 367 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 MRPL40Q9NQ50 206 aaKnown RBP12.45□□□□□ -0.42
PAX6-245ENST00000638914 PDXKO00764 312 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 NDUFA10O95299 355 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 MAP3K14Q99558 947 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 SPATA16Q9BXB7 569 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 PLEKHA4Q9H4M7 779 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 MSCO60682 206 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 RBL2Q08999 1139 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 DPCR1Q3MIW9 517 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 RESP18Q5W5W9 173 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 TAS2R42Q7RTR8 314 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 FRMD5Q7Z6J6 570 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 GPRASP2Q96D09 838 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 COG4Q9H9E3 785 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 CLCA2Q9UQC9 943 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 PTPAQ15257 358 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 SARS2Q9NP81 518 aaKnown RBP12.45□□□□□ -0.42
PAX6-245ENST00000638914 ATP8A1Q9Y2Q0 1164 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 THPOP40225 353 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 NSUN2Q08J23 767 aaKnown RBP eCLIP12.45□□□□□ -0.42
PAX6-245ENST00000638914 ZNF484Q5JVG2 852 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 ASPSCR1Q9BZE9 553 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 CROCC2H7BZ55 1655 aa12.45□□□□□ -0.42
PAX6-245ENST00000638914 ALDH1A2O94788 518 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 RPL10AP62906 217 aaKnown RBP12.44□□□□□ -0.42
PAX6-245ENST00000638914 MOV10L1Q9BXT6 1211 aaKnown RBP12.44□□□□□ -0.42
PAX6-245ENST00000638914 CATSPERBQ9H7T0 1116 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 ENTPD7Q9NQZ7 604 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 SLC30A1Q9Y6M5 507 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 BAG2O95816 211 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 PDCD2Q16342 344 aaPredicted RBP12.44□□□□□ -0.42
PAX6-245ENST00000638914 HP1BP3Q5SSJ5 553 aaPredicted RBP12.44□□□□□ -0.42
PAX6-245ENST00000638914 TDRD10Q5VZ19 366 aaKnown RBP12.44□□□□□ -0.42
PAX6-245ENST00000638914 CRLF3Q8IUI8 442 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 NT5C1AQ9BXI3 368 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 EPB41L5Q9HCM4 733 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 NEDD4P46934 1319 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 PDS5AQ29RF7 1337 aaKnown RBP12.44□□□□□ -0.42
PAX6-245ENST00000638914 ANP32DO95626 131 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 CLTAP09496 248 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 ODC1P11926 461 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 FOXO4P98177 505 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 KLHL38Q2WGJ6 581 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 MTBPQ96DY7 904 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 MTSS1O43312 755 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 DTNBO60941 627 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 OCM2P0CE71 109 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 OCMP0CE72 109 aaPredicted RBP12.44□□□□□ -0.42
PAX6-245ENST00000638914 EFCAB12Q6NXP0 572 aa12.44□□□□□ -0.42
PAX6-245ENST00000638914 RRM2BQ7LG56 351 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms