RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 STK32CQ86UX6 486 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 FAM186BQ8IYM0 893 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 UNC5BQ8IZJ1 945 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 GLB1L3Q8NCI6 653 aaPredicted RBP3.71□□□□□ -1.82
GYPB-216ENST00000638448 FAM156AQ8NDB6 213 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 NSUN6Q8TEA1 469 aaKnown RBP3.71□□□□□ -1.82
GYPB-216ENST00000638448 HOXB13Q92826 284 aaPredicted RBP3.71□□□□□ -1.82
GYPB-216ENST00000638448 PGBD4Q96DM1 585 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 BORCS6Q96GS4 357 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 CDK5RAP3Q96JB5 506 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 SLC2A13Q96QE2 648 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 MYD88Q99836 296 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 NOL10Q9BSC4 688 aaKnown RBP3.71□□□□□ -1.82
GYPB-216ENST00000638448 C11orf84Q9BUA3 381 aaPredicted RBP3.71□□□□□ -1.82
GYPB-216ENST00000638448 ADI1Q9BV57 179 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 NAA15Q9BXJ9 866 aaKnown RBP3.71□□□□□ -1.82
GYPB-216ENST00000638448 B3GNT5Q9BYG0 378 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 UBA5Q9GZZ9 404 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 PLCB1Q9NQ66 1216 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 PADI4Q9UM07 663 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 LIMCH1Q9UPQ0 1083 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 POLHQ9Y253 713 aa3.71□□□□□ -1.82
GYPB-216ENST00000638448 ABHD14A-ACY1A0A1B0GW23 586 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 A0A1W2PR48 441 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 RASA4BC9J798 803 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 RASA4O43374 803 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 MGEA5O60502 916 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 CYP7B1O75881 506 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 FTH1P19P0C7X4 201 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 SETSIPP0DME0 302 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 ZKSCAN1P17029 563 aaPredicted RBP3.7□□□□□ -1.82
GYPB-216ENST00000638448 RPL13P26373 211 aaKnown RBP3.7□□□□□ -1.82
GYPB-216ENST00000638448 ITGA1P56199 1179 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 WNT3AP56704 352 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 PPP3CAQ08209 521 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 IFIT5Q13325 482 aaKnown RBP3.7□□□□□ -1.82
GYPB-216ENST00000638448 ZNF827Q17R98 1081 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 C19orf54Q5BKX5 351 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 DGKKQ5KSL6 1271 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 FAM83BQ5T0W9 1011 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 C10orf62Q5T681 223 aaPredicted RBP3.7□□□□□ -1.82
GYPB-216ENST00000638448 TMEM200BQ69YZ2 307 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 LMBR1LQ6UX01 489 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 NPNTQ6UXI9 565 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 CD300LDQ6UXZ3 194 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 CCDC149Q6ZUS6 474 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 MAEAQ7L5Y9 396 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 IFNL2Q8IZJ0 200 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.7□□□□□ -1.825e-10■□□□□ 9.2
GYPB-216ENST00000638448 WDR48Q8TAF3 677 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 DEPTORQ8TB45 409 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 PPM1EQ8WY54 764 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 MTFMTQ96DP5 389 aaKnown RBP3.7□□□□□ -1.82
GYPB-216ENST00000638448 CYFIP2Q96F07 1278 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 FDXACB1Q9BRP7 624 aaPredicted RBP3.7□□□□□ -1.82
GYPB-216ENST00000638448 LRFN3Q9BTN0 628 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 SLC39A2Q9NP94 309 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 KCND1Q9NSA2 647 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 POLR3BQ9NW08 1133 aaPredicted RBP3.7□□□□□ -1.82
GYPB-216ENST00000638448 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.7□□□□□ -1.82
GYPB-216ENST00000638448 RGS17Q9UGC6 210 aaPredicted RBP3.7□□□□□ -1.82
GYPB-216ENST00000638448 PUF60Q9UHX1 559 aaKnown RBP3.7□□□□□ -1.82
GYPB-216ENST00000638448 CNOT11Q9UKZ1 510 aaKnown RBP3.7□□□□□ -1.82
GYPB-216ENST00000638448 VWA7Q9Y334 891 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 RPTORQ8N122 1335 aa3.7□□□□□ -1.82
GYPB-216ENST00000638448 A0A0A6YYK5 440 aaPredicted RBP3.69□□□□□ -1.82
GYPB-216ENST00000638448 TCEA3O75764 348 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 FSBPO95073 299 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 ALDH2P05091 517 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 ITGB3P05106 788 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 TYRP1P17643 537 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 PEX2P28328 305 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 HK3P52790 923 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 SESN2P58004 480 aaPredicted RBP3.69□□□□□ -1.82
GYPB-216ENST00000638448 IL13RA1P78552 427 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 CDK17Q00537 523 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 CDC42EP1Q00587 391 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 DSC2Q02487 901 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 PUM1Q14671 1186 aaKnown RBP eCLIP3.69□□□□□ -1.82
GYPB-216ENST00000638448 KIAA0753Q2KHM9 967 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 MST1LQ2TV78 715 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 C3orf36Q3SXR2 165 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 INO80DQ53TQ3 878 aaPredicted RBP3.69□□□□□ -1.82
GYPB-216ENST00000638448 PRR16Q569H4 304 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 RNF220Q5VTB9 566 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 GRAMD4Q6IC98 578 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 ERAP2Q6P179 960 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 GAREM2Q75VX8 874 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 DAAM2Q86T65 1068 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 KYQ8NBH2 561 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 GPR156Q8NFN8 814 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 PPP1R35Q8TAP8 253 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 KLHDC4Q8TBB5 520 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 NRG4Q8WWG1 115 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 LRTOMTQ8WZ04 291 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 RGMAQ96B86 450 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 SGCZQ96LD1 299 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 SAMD11Q96NU1 681 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 CGRRF1Q99675 332 aa3.69□□□□□ -1.82
GYPB-216ENST00000638448 C7orf25Q9BPX7 421 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms