RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 SRRM1Q8IYB3 904 aaKnown RBP21.66■■□□□ 1.06
CACNA1A-243ENST00000637616 TMEM109Q9BVC6 243 aa21.66■■□□□ 1.06
CACNA1A-243ENST00000637616 ECEL1O95672 775 aa21.66■■□□□ 1.06
CACNA1A-243ENST00000637616 ALADP13716 330 aa21.66■■□□□ 1.06
CACNA1A-243ENST00000637616 PPP3CAQ08209 521 aa21.66■■□□□ 1.06
CACNA1A-243ENST00000637616 MIGA2Q7L4E1 593 aa21.66■■□□□ 1.06
CACNA1A-243ENST00000637616 KIAA0825Q8IV33 1275 aa21.66■■□□□ 1.06
CACNA1A-243ENST00000637616 FMNL3Q8IVF7 1028 aa21.66■■□□□ 1.06
CACNA1A-243ENST00000637616 FIZ1Q96SL8 496 aa21.66■■□□□ 1.06
CACNA1A-243ENST00000637616 CHST7Q9NS84 486 aa21.66■■□□□ 1.06
CACNA1A-243ENST00000637616 WRAP73Q9P2S5 460 aaPredicted RBP21.66■■□□□ 1.06
CACNA1A-243ENST00000637616 ARL2BPQ9Y2Y0 163 aa21.66■■□□□ 1.06
CACNA1A-243ENST00000637616 BFSP1Q12934 665 aa21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 Q4G0T1 1027 aa21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 C11orf63Q6NUN7 778 aa21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 ANKLE1Q8NAG6 615 aa21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 NUP85Q9BW27 656 aa21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 MTUS1Q9ULD2 1270 aa21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 STX2P32856 288 aa21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 FAM98CQ17RN3 349 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 DAB2IPQ5VWQ8 1189 aa21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 MFSD5Q6N075 450 aa21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 ETNK1Q9HBU6 452 aa21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 ARHGEF3Q9NR81 526 aa21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 CNTNAP4Q9C0A0 1308 aa21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 TNRC6CQ9HCJ0 1690 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-243ENST00000637616 LRCH2Q5VUJ6 765 aa21.64■■□□□ 1.06
CACNA1A-243ENST00000637616 TRIM68Q6AZZ1 485 aa21.64■■□□□ 1.06
CACNA1A-243ENST00000637616 NOP9Q86U38 636 aaKnown RBP21.64■■□□□ 1.06
CACNA1A-243ENST00000637616 SLC47A2Q86VL8 602 aa21.64■■□□□ 1.06
CACNA1A-243ENST00000637616 CCHCR1Q8TD31 782 aa21.64■■□□□ 1.06
CACNA1A-243ENST00000637616 SH2D3AQ9BRG2 576 aa21.64■■□□□ 1.06
CACNA1A-243ENST00000637616 ADAM33Q9BZ11 813 aa21.64■■□□□ 1.06
CACNA1A-243ENST00000637616 SLC5A4Q9NY91 659 aa21.64■■□□□ 1.06
CACNA1A-243ENST00000637616 PCDHAC2Q9Y5I4 1007 aa21.64■■□□□ 1.06
CACNA1A-243ENST00000637616 KIF13BQ9NQT8 1826 aa21.64■■□□□ 1.06
CACNA1A-243ENST00000637616 CYP26A1O43174 497 aa21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 CCND1P24385 295 aa21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 CERS5Q8N5B7 392 aa21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 CKAP2Q8WWK9 683 aa21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 TMEM237Q96Q45 408 aa21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 GAP43P17677 238 aa21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 ANKRD20A2Q5SQ80 823 aa21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 RBM26Q5T8P6 1007 aaKnown RBP21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 ANKRD20A1Q5TYW2 823 aa21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 ANKRD20A3Q5VUR7 823 aa21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 ECHDC2Q86YB7 292 aa21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 ZNF564Q8TBZ8 553 aaPredicted RBP21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 RUNDC3BQ96NL0 473 aa21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 KIF9Q9HAQ2 790 aa21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 NKX1-2Q9UD57 310 aaPredicted RBP21.64■■□□□ 1.05
CACNA1A-243ENST00000637616 BCRP11274 1271 aa21.63■■□□□ 1.05
CACNA1A-243ENST00000637616 ZNF131P52739 623 aa21.63■■□□□ 1.05
CACNA1A-243ENST00000637616 SGO2Q562F6 1265 aa21.63■■□□□ 1.05
CACNA1A-243ENST00000637616 SPOCK2Q92563 424 aa21.63■■□□□ 1.05
CACNA1A-243ENST00000637616 FAM20AQ96MK3 541 aa21.63■■□□□ 1.05
CACNA1A-243ENST00000637616 HSD17B14Q9BPX1 270 aa21.63■■□□□ 1.05
CACNA1A-243ENST00000637616 HERPUD2Q9BSE4 406 aa21.63■■□□□ 1.05
CACNA1A-243ENST00000637616 AMNQ9BXJ7 453 aa21.63■■□□□ 1.05
CACNA1A-243ENST00000637616 HSPA6P17066 643 aa21.63■■□□□ 1.05
CACNA1A-243ENST00000637616 AP3B2Q13367 1082 aa21.63■■□□□ 1.05
CACNA1A-243ENST00000637616 SAMD1Q6SPF0 538 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-243ENST00000637616 TRIM7Q9C029 511 aa21.63■■□□□ 1.05
CACNA1A-243ENST00000637616 RXFP1Q9HBX9 757 aa21.63■■□□□ 1.05
CACNA1A-243ENST00000637616 CLGNO14967 610 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 EIF3DO15371 548 aaKnown RBP eCLIP21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 THAP12O43422 761 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 ITGA8P53708 1063 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 CD101Q93033 1021 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 C9orf72Q96LT7 481 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 COL14A1Q05707 1796 aaKnown RBP21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 TBX3O15119 743 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 GJB6O95452 261 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 FOXN2P32314 431 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 SREBF1P36956 1147 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 C2CD6Q53TS8 623 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 TRMT10CQ7L0Y3 403 aaKnown RBP21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 ASRGL1Q7L266 308 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 CROCCP2Q86T23 111 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 FBXO11Q86XK2 927 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 UTP4Q969X6 686 aaKnown RBP21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 ZNF653Q96CK0 615 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 POLR3CQ9BUI4 534 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 WDR18Q9BV38 432 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 ROPN1BQ9BZX4 212 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 ROPN1Q9HAT0 212 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 DMAC2Q9NW81 257 aa21.62■■□□□ 1.05
CACNA1A-243ENST00000637616 ENO4A6NNW6 628 aa21.61■■□□□ 1.05
CACNA1A-243ENST00000637616 SPAG7O75391 227 aa21.61■■□□□ 1.05
CACNA1A-243ENST00000637616 ATP2A2P16615 1042 aaKnown RBP21.61■■□□□ 1.05
CACNA1A-243ENST00000637616 ATP2B4P23634 1241 aa21.61■■□□□ 1.05
CACNA1A-243ENST00000637616 CYFIP1Q7L576 1253 aa21.61■■□□□ 1.05
CACNA1A-243ENST00000637616 WNT8AQ9H1J5 351 aa21.61■■□□□ 1.05
CACNA1A-243ENST00000637616 KLHL14Q9P2G3 628 aa21.61■■□□□ 1.05
CACNA1A-243ENST00000637616 PRKAG3Q9UGI9 489 aa21.61■■□□□ 1.05
CACNA1A-243ENST00000637616 ZMYND8Q9ULU4 1186 aaPredicted RBP21.61■■□□□ 1.05
CACNA1A-243ENST00000637616 GDF11O95390 407 aa21.61■■□□□ 1.05
CACNA1A-243ENST00000637616 LACTBP83111 547 aaPredicted RBP21.61■■□□□ 1.05
CACNA1A-243ENST00000637616 EPC2Q52LR7 807 aa21.61■■□□□ 1.05
CACNA1A-243ENST00000637616 HP1BP3Q5SSJ5 553 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms