RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 SUSD6Q92537 303 aa20.92■□□□□ 0.94
CLN6-221ENST00000637494 CDK5RAP3Q96JB5 506 aa20.92■□□□□ 0.94
CLN6-221ENST00000637494 RPGRIP1Q96KN7 1286 aa20.92■□□□□ 0.94
CLN6-221ENST00000637494 ZFP42Q96MM3 310 aa20.92■□□□□ 0.94
CLN6-221ENST00000637494 NECTIN4Q96NY8 510 aa20.92■□□□□ 0.94
CLN6-221ENST00000637494 S1PR5Q9H228 398 aa20.92■□□□□ 0.94
CLN6-221ENST00000637494 LOC730098B7Z3J9 87 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 B4GALT3O60512 393 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 SOD2P04179 222 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 KLRC2P26717 231 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 ATP2C1P98194 919 aaPredicted RBP20.91■□□□□ 0.94
CLN6-221ENST00000637494 PTPN14Q15678 1187 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 ZRSR1Q15695 479 aaKnown RBP20.91■□□□□ 0.94
CLN6-221ENST00000637494 KIAA1841Q6NSI8 718 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 SYCE2Q6PIF2 218 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 ELMSAN1Q6PJG2 1045 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 PHLPP2Q6ZVD8 1323 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 BSNDQ8WZ55 320 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 DRC1Q96MC2 740 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 RIPOR3Q96MK2 946 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 NT5C3AQ9H0P0 336 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 ADAM7Q9H2U9 754 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 NR2E1Q9Y466 385 aa20.91■□□□□ 0.94
CLN6-221ENST00000637494 E9PMD0 336 aa20.9■□□□□ 0.94
CLN6-221ENST00000637494 K7ERI5 159 aa20.9■□□□□ 0.94
CLN6-221ENST00000637494 MTHFRP42898 656 aa20.9■□□□□ 0.94
CLN6-221ENST00000637494 DSC1Q08554 894 aa20.9■□□□□ 0.94
CLN6-221ENST00000637494 DCAF4L1Q3SXM0 396 aa20.9■□□□□ 0.94
CLN6-221ENST00000637494 HERC4Q5GLZ8 1057 aaPredicted RBP20.9■□□□□ 0.94
CLN6-221ENST00000637494 ARL6IP4Q66PJ3 421 aaKnown RBP20.9■□□□□ 0.94
CLN6-221ENST00000637494 CABP7Q86V35 215 aa20.9■□□□□ 0.94
CLN6-221ENST00000637494 KCTD17Q8N5Z5 321 aa20.9■□□□□ 0.94
CLN6-221ENST00000637494 HERC2P3Q9BVR0 1158 aa20.9■□□□□ 0.94
CLN6-221ENST00000637494 TIPINQ9BVW5 301 aa20.9■□□□□ 0.94
CLN6-221ENST00000637494 PDZD7Q9H5P4 517 aa20.9■□□□□ 0.94
CLN6-221ENST00000637494 MIOSQ9NXC5 875 aa20.9■□□□□ 0.94
CLN6-221ENST00000637494 KLK14Q9P0G3 267 aa20.9■□□□□ 0.94
CLN6-221ENST00000637494 MUTYHQ9UIF7 546 aa20.9■□□□□ 0.94
CLN6-221ENST00000637494 CCDC169A6NNP5 214 aa20.89■□□□□ 0.93
CLN6-221ENST00000637494 PP2D1A8MPX8 630 aa20.89■□□□□ 0.93
CLN6-221ENST00000637494 DMP1Q13316 513 aaPredicted RBP20.89■□□□□ 0.93
CLN6-221ENST00000637494 VN1R3Q9BXE9 311 aa20.89■□□□□ 0.93
CLN6-221ENST00000637494 CCDC113Q9H0I3 377 aa20.89■□□□□ 0.93
CLN6-221ENST00000637494 DPP7Q9UHL4 492 aa20.89■□□□□ 0.93
CLN6-221ENST00000637494 KCNG1Q9UIX4 513 aa20.89■□□□□ 0.93
CLN6-221ENST00000637494 VWA3AA6NCI4 1184 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 C2CD2LO14523 706 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 BMP15O95972 392 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 ADH1AP07327 375 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 CDC25AP30304 524 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 GLUD2P49448 558 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 IL17AQ16552 155 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 ATAT1Q5SQI0 421 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 RARS2Q5T160 578 aaKnown RBP20.88■□□□□ 0.93
CLN6-221ENST00000637494 KLHL5Q96PQ7 755 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 KIFC3Q9BVG8 833 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 C17orf75Q9HAS0 396 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 C11orf16Q9NQ32 467 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 MARCH5Q9NX47 278 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 SNTG2Q9NY99 539 aa20.88■□□□□ 0.93
CLN6-221ENST00000637494 RBM19Q9Y4C8 960 aaKnown RBP20.88■□□□□ 0.93
CLN6-221ENST00000637494 TDRD15B5MCY1 1934 aaKnown RBP20.88■□□□□ 0.93
CLN6-221ENST00000637494 HIP1RO75146 1068 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 TADA2AO75478 443 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 THP07101 528 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 EPCAMP16422 314 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 PDCP20941 246 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 PEX3P56589 373 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 ATF7IP2Q5U623 682 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 BRAPQ7Z569 592 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 SLC22A17Q8WUG5 538 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 FBXL18Q96ME1 805 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 SFXN1Q9H9B4 322 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 POLD4Q9HCU8 107 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 KMT5AQ9NQR1 393 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 TSHZ2Q9NRE2 1034 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 ADAM28Q9UKQ2 775 aa20.87■□□□□ 0.93
CLN6-221ENST00000637494 CNPP09543 421 aaKnown RBP20.86■□□□□ 0.93
CLN6-221ENST00000637494 CREMQ03060 361 aa20.86■□□□□ 0.93
CLN6-221ENST00000637494 TUSC3Q13454 348 aa20.86■□□□□ 0.93
CLN6-221ENST00000637494 USP41Q3LFD5 358 aa20.86■□□□□ 0.93
CLN6-221ENST00000637494 RINT1Q6NUQ1 792 aa20.86■□□□□ 0.93
CLN6-221ENST00000637494 ZBTB33Q86T24 672 aa20.86■□□□□ 0.93
CLN6-221ENST00000637494 EDAQ92838 391 aa20.86■□□□□ 0.93
CLN6-221ENST00000637494 AK8Q96MA6 479 aa20.86■□□□□ 0.93
CLN6-221ENST00000637494 TTLL13PA6NNM8 815 aa20.85■□□□□ 0.93
CLN6-221ENST00000637494 SLC26A4O43511 780 aa20.85■□□□□ 0.93
CLN6-221ENST00000637494 RECQL4O94761 1208 aa20.85■□□□□ 0.93
CLN6-221ENST00000637494 NPTX2P47972 431 aa20.85■□□□□ 0.93
CLN6-221ENST00000637494 CLCN4P51793 760 aa20.85■□□□□ 0.93
CLN6-221ENST00000637494 SMTNP53814 917 aa20.85■□□□□ 0.93
CLN6-221ENST00000637494 HSP90AA2PQ14568 343 aaPredicted RBP20.85■□□□□ 0.93
CLN6-221ENST00000637494 FUT10Q6P4F1 479 aa20.85■□□□□ 0.93
CLN6-221ENST00000637494 GSTCDQ8NEC7 633 aa20.85■□□□□ 0.93
CLN6-221ENST00000637494 CALML4Q96GE6 196 aa20.85■□□□□ 0.93
CLN6-221ENST00000637494 MMTAG2Q9BU76 263 aaKnown RBP20.85■□□□□ 0.93
CLN6-221ENST00000637494 MRPL4Q9BYD3 311 aaKnown RBP20.85■□□□□ 0.93
CLN6-221ENST00000637494 TMEM134Q9H6X4 195 aa20.85■□□□□ 0.93
CLN6-221ENST00000637494 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.85■□□□□ 0.93
CLN6-221ENST00000637494 TNFSF13BQ9Y275 285 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms