RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 MCPH1Q8NEM0 835 aa20.47■□□□□ 0.87
CLN6-220ENST00000637450 NACC1Q96RE7 527 aa20.47■□□□□ 0.87
CLN6-220ENST00000637450 COLEC11Q9BWP8 271 aa20.47■□□□□ 0.87
CLN6-220ENST00000637450 RXFP1Q9HBX9 757 aa20.47■□□□□ 0.87
CLN6-220ENST00000637450 SPDYE4A6NLX3 237 aa20.46■□□□□ 0.87
CLN6-220ENST00000637450 F8W810 466 aa20.46■□□□□ 0.87
CLN6-220ENST00000637450 TEX28O15482 410 aa20.46■□□□□ 0.87
CLN6-220ENST00000637450 NPTXRO95502 500 aa20.46■□□□□ 0.87
CLN6-220ENST00000637450 ASGR2P07307 311 aa20.46■□□□□ 0.87
CLN6-220ENST00000637450 GLUD2P49448 558 aa20.46■□□□□ 0.87
CLN6-220ENST00000637450 DSG1Q02413 1049 aa20.46■□□□□ 0.87
CLN6-220ENST00000637450 CDCA2Q69YH5 1023 aaPredicted RBP20.46■□□□□ 0.87
CLN6-220ENST00000637450 PPP4R3CPQ6ZMV5 832 aa20.46■□□□□ 0.87
CLN6-220ENST00000637450 C15orf39Q6ZRI6 1047 aa20.46■□□□□ 0.87
CLN6-220ENST00000637450 C8orf76Q96K31 380 aa20.46■□□□□ 0.87
CLN6-220ENST00000637450 PRIMPOLQ96LW4 560 aa20.46■□□□□ 0.87
CLN6-220ENST00000637450 LLPHQ9BRT6 129 aaKnown RBP20.46■□□□□ 0.87
CLN6-220ENST00000637450 FZD8Q9H461 694 aa20.46■□□□□ 0.87
CLN6-220ENST00000637450 CHST7Q9NS84 486 aa20.46■□□□□ 0.87
CLN6-220ENST00000637450 PRMT7Q9NVM4 692 aaPredicted RBP20.46■□□□□ 0.87
CLN6-220ENST00000637450 LRRIQ4A6NIV6 560 aa20.45■□□□□ 0.86
CLN6-220ENST00000637450 ADH1AP07327 375 aa20.45■□□□□ 0.86
CLN6-220ENST00000637450 RPA1P27694 616 aa20.45■□□□□ 0.86
CLN6-220ENST00000637450 ORC2Q13416 577 aaPredicted RBP20.45■□□□□ 0.86
CLN6-220ENST00000637450 ZNF174Q15697 407 aa20.45■□□□□ 0.86
CLN6-220ENST00000637450 FAM187BQ17R55 369 aa20.45■□□□□ 0.86
CLN6-220ENST00000637450 CCDC83Q8IWF9 413 aa20.45■□□□□ 0.86
CLN6-220ENST00000637450 CMASQ8NFW8 434 aaPredicted RBP20.45■□□□□ 0.86
CLN6-220ENST00000637450 ACSF2Q96CM8 615 aaPredicted RBP20.45■□□□□ 0.86
CLN6-220ENST00000637450 PHOX2BQ99453 314 aa20.45■□□□□ 0.86
CLN6-220ENST00000637450 FOXP1Q9H334 677 aaPredicted RBP20.45■□□□□ 0.86
CLN6-220ENST00000637450 SMOC2Q9H3U7 446 aa20.45■□□□□ 0.86
CLN6-220ENST00000637450 PARP2Q9UGN5 583 aa20.45■□□□□ 0.86
CLN6-220ENST00000637450 ZMYM2Q9UBW7 1377 aa20.45■□□□□ 0.86
CLN6-220ENST00000637450 MYO10Q9HD67 2058 aa20.44■□□□□ 0.86
CLN6-220ENST00000637450 ARID2Q68CP9 1835 aa20.44■□□□□ 0.86
CLN6-220ENST00000637450 OR52Z1P0C646 297 aa20.44■□□□□ 0.86
CLN6-220ENST00000637450 CCDC149Q6ZUS6 474 aa20.44■□□□□ 0.86
CLN6-220ENST00000637450 OTOP3Q7RTS5 596 aa20.44■□□□□ 0.86
CLN6-220ENST00000637450 ERMNQ8TAM6 284 aa20.44■□□□□ 0.86
CLN6-220ENST00000637450 GPR62Q9BZJ7 368 aa20.44■□□□□ 0.86
CLN6-220ENST00000637450 MAN1C1Q9NR34 630 aa20.44■□□□□ 0.86
CLN6-220ENST00000637450 KLK14Q9P0G3 267 aa20.44■□□□□ 0.86
CLN6-220ENST00000637450 DPP7Q9UHL4 492 aa20.44■□□□□ 0.86
CLN6-220ENST00000637450 GLUD1P00367 558 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 C1RP00736 705 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 CYP11B2P19099 503 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 NUBP1P53384 320 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 GRIK3Q13003 919 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 POTEGQ6S5H5 508 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 PADI6Q6TGC4 694 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 CYP26C1Q6V0L0 522 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 ZBTB8OSQ8IWT0 167 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 GPR65Q8IYL9 337 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 FBXO18Q8NFZ0 1043 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 RHOBTB2Q9BYZ6 727 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 C2orf40Q9H1Z8 148 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 CACNA1HO95180 2353 aa20.43■□□□□ 0.86
CLN6-220ENST00000637450 CCDC195A0A1B0GUA6 201 aa20.42■□□□□ 0.86
CLN6-220ENST00000637450 TTLL13PA6NNM8 815 aa20.42■□□□□ 0.86
CLN6-220ENST00000637450 MUTP22033 750 aa20.42■□□□□ 0.86
CLN6-220ENST00000637450 USP41Q3LFD5 358 aa20.42■□□□□ 0.86
CLN6-220ENST00000637450 FUT10Q6P4F1 479 aa20.42■□□□□ 0.86
CLN6-220ENST00000637450 HDAC7Q8WUI4 952 aa20.42■□□□□ 0.86
CLN6-220ENST00000637450 BSNDQ8WZ55 320 aa20.42■□□□□ 0.86
CLN6-220ENST00000637450 B3GALT6Q96L58 329 aa20.42■□□□□ 0.86
CLN6-220ENST00000637450 ZSCAN31Q96LW9 406 aaPredicted RBP20.42■□□□□ 0.86
CLN6-220ENST00000637450 ADAM28Q9UKQ2 775 aa20.42■□□□□ 0.86
CLN6-220ENST00000637450 USP34Q70CQ2 3546 aa20.41■□□□□ 0.86
CLN6-220ENST00000637450 ARHGEF35A5YM69 484 aa20.41■□□□□ 0.86
CLN6-220ENST00000637450 PAPLNO95428 1278 aa20.41■□□□□ 0.86
CLN6-220ENST00000637450 RBM25P49756 843 aaKnown RBP20.41■□□□□ 0.86
CLN6-220ENST00000637450 HMGN5P82970 282 aaKnown RBP20.41■□□□□ 0.86
CLN6-220ENST00000637450 TTC38Q5R3I4 469 aa20.41■□□□□ 0.86
CLN6-220ENST00000637450 ELMSAN1Q6PJG2 1045 aa20.41■□□□□ 0.86
CLN6-220ENST00000637450 NOSTRINQ8IVI9 506 aa20.41■□□□□ 0.86
CLN6-220ENST00000637450 C4orf32Q8N8J7 132 aa20.41■□□□□ 0.86
CLN6-220ENST00000637450 RABGGTAQ92696 567 aa20.41■□□□□ 0.86
CLN6-220ENST00000637450 PDZD7Q9H5P4 517 aa20.41■□□□□ 0.86
CLN6-220ENST00000637450 WDR6Q9NNW5 1121 aaKnown RBP20.41■□□□□ 0.86
CLN6-220ENST00000637450 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.41■□□□□ 0.86
CLN6-220ENST00000637450 FNIP2Q9P278 1114 aa20.41■□□□□ 0.86
CLN6-220ENST00000637450 ACKR2O00590 384 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 N4BP3O15049 544 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 TADA2AO75478 443 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 SPATA31D3P0C874 917 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 NAMPTP43490 491 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 TRAPPC10P48553 1259 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 PRPF4BQ13523 1007 aaKnown RBP20.4■□□□□ 0.86
CLN6-220ENST00000637450 HSP90AA2PQ14568 343 aaPredicted RBP20.4■□□□□ 0.86
CLN6-220ENST00000637450 MAPK6Q16659 721 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 SPATA31D4Q6ZUB0 917 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 PALB2Q86YC2 1186 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 PAAF1Q9BRP4 392 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 CCDC113Q9H0I3 377 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 IRF2BPLQ9H1B7 796 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 PLEKHA4Q9H4M7 779 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 KCNK12Q9HB15 430 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 SNTG2Q9NY99 539 aa20.4■□□□□ 0.86
CLN6-220ENST00000637450 TGM5O43548 720 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms