RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 MCM4P33991 863 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 KRT9P35527 623 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 SKIV2L2P42285 1042 aaKnown RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 NPTX2P47972 431 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 KCNJ6P48051 423 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 KCNC1P48547 511 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 MCM2P49736 904 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 PMS1P54277 932 aaKnown RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 USP14P54578 494 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 SLC12A2P55011 1212 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 RRP1P56182 461 aaKnown RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 POLR2FP61218 127 aaKnown RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 RBM6P78332 1123 aaKnown RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 TMPRSS15P98073 1019 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 RHDQ02161 417 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 CDC16Q13042 620 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 PWP1Q13610 501 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 GTF2H3Q13889 308 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 SPARCL1Q14515 664 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 PPA1Q15181 289 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 RABEP1Q15276 862 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 OASLQ15646 514 aaKnown RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 SLC10A6Q3KNW5 377 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 ANKDD1AQ495B1 522 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 C5orf22Q49AR2 442 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 KRTCAP3Q53RY4 240 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 PRR16Q569H4 304 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 CAVIN4Q5BKX8 364 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 SPDYCQ5MJ68 293 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 UBXN11Q5T124 520 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 LRCH2Q5VUJ6 765 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 FAM205BPQ63HN1 556 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 KCNV1Q6PIU1 500 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 LRRC49Q8IUZ0 686 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 TRMT2AQ8IZ69 625 aaKnown RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 ADGRG2Q8IZP9 1017 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 THEMISQ8N1K5 641 aaPredicted RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 Q8N1X5 172 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 ZNF619Q8N2I2 560 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 CPA6Q8N4T0 437 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 PCYOX1LQ8NBM8 494 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 IPMKQ8NFU5 416 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 SLC30A5Q8TAD4 765 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 SUN5Q8TC36 379 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 ZNF669Q96BR6 464 aaPredicted RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 KIF1BPQ96EK5 621 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 NAF1Q96HR8 494 aaKnown RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 CLUHP3Q96NS8 147 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 NOC4LQ9BVI4 516 aaKnown RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 TTLL2Q9BWV7 592 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 NACA2Q9H009 215 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 TSPYL1Q9H0U9 437 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 PLSCR4Q9NRQ2 329 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 VPS45Q9NRW7 570 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 TCP11L1Q9NUJ3 509 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 PSD3Q9NYI0 1048 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 UBP1Q9NZI7 540 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 HECAQ9UBI9 543 aaPredicted RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 EIF2B4Q9UI10 523 aaKnown RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 CYP8B1Q9UNU6 501 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 TRAF3IP3Q9Y228 551 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 PTPN22Q9Y2R2 807 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 GIT1Q9Y2X7 761 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 TMEM98Q9Y2Y6 226 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 NOSIPQ9Y314 301 aaKnown RBP3.35□□□□□ -1.87
VIM-210ENST00000637053 SAMM50Q9Y512 469 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 PCDHA5Q9Y5H7 936 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 DUSP10Q9Y6W6 482 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 RNF123Q5XPI4 1314 aa3.35□□□□□ -1.87
VIM-210ENST00000637053 CCDC69A6NI79 296 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 B2RBV5 119 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 C1QTNF3-AMACRE9PGA6 284 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 H0Y626 953 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 KIF2AO00139 706 aaPredicted RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 GFRA2O00451 464 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 NDC80O14777 642 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 PLD2O14939 933 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 MCF2LO15068 1137 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 MYO1BO43795 1136 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 ADCY3O60266 1144 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 DGKIO75912 1065 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 LETM1O95202 739 aaPredicted RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 GOSR1O95249 250 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 TBC1D8O95759 1140 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 APOA4P06727 396 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 SDSP20132 328 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 PBLDP30039 288 aaPredicted RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 GBP2P32456 591 aaPredicted RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 IL6STP40189 918 aaPredicted RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 HADHAP40939 763 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 ETV3P41162 512 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 HNF4AP41235 474 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 GIPRP48546 466 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 KIF11P52732 1056 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 CLNS1AP54105 237 aaKnown RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 NCKAP1LP55160 1127 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 EIF6P56537 245 aaKnown RBP3.34□□□□□ -1.87
VIM-210ENST00000637053 DCAF7P61962 342 aa3.34□□□□□ -1.87
VIM-210ENST00000637053 SARNPP82979 210 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms