RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 C4orf48Q5BLP8 95 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 FAM102BQ5T8I3 360 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 ZNF658Q5TYW1 1059 aaPredicted RBP7.39□□□□□ -1.23
UPF3B-205ENST00000636792 ZPBP2Q6X784 338 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 TSHZ1Q6ZSZ6 1077 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 LRRC8DQ7L1W4 858 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 VASH1Q7L8A9 365 aaPredicted RBP7.39□□□□□ -1.23
UPF3B-205ENST00000636792 MAP4K3Q8IVH8 894 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 ARMC2Q8NEN0 867 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 GOLGA5Q8TBA6 731 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 TRAPPC12Q8WVT3 735 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 PRPF31Q8WWY3 499 aaKnown RBP7.39□□□□□ -1.23
UPF3B-205ENST00000636792 DHX38Q92620 1227 aaKnown RBP7.39□□□□□ -1.23
UPF3B-205ENST00000636792 FIZ1Q96SL8 496 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 PLIN2Q99541 437 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 NOC4LQ9BVI4 516 aaKnown RBP7.39□□□□□ -1.23
UPF3B-205ENST00000636792 TRAIPQ9BWF2 469 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 FTHL17Q9BXU8 183 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 CELF4Q9BZC1 486 aaKnown RBP7.39□□□□□ -1.23
UPF3B-205ENST00000636792 HIPK3Q9H422 1215 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 SUGCTQ9HAC7 445 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 KMT5AQ9NQR1 393 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 CHST12Q9NRB3 414 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 PRKAG2Q9UGJ0 569 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 MAP4K5Q9Y4K4 846 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.39□□□□□ -1.23
UPF3B-205ENST00000636792 CITO14578 2027 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 COL4A6Q14031 1691 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 CNTNAP2Q9UHC6 1331 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 TMEM150BA6NC51 233 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 LRRIQ4A6NIV6 560 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 RSPH10B2B2RC85 870 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 CFAP99D6REC4 459 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 K7ENM7 598 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 GPR182O15218 404 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 PQBP1O60828 265 aaKnown RBP7.38□□□□□ -1.23
UPF3B-205ENST00000636792 GPR32O75388 356 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 ERLIN2O94905 339 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 CXCL10P02778 98 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 RSPH10BP0C881 870 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 SKIP12755 728 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 EIF4BP23588 611 aaKnown RBP7.38□□□□□ -1.23
UPF3B-205ENST00000636792 PEX3P56589 373 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 NLRP11P59045 1033 aaKnown RBP7.38□□□□□ -1.23
UPF3B-205ENST00000636792 GTF2BQ00403 316 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 PLCB2Q00722 1185 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 POU5F1Q01860 360 aaKnown RBP7.38□□□□□ -1.23
UPF3B-205ENST00000636792 TLE2Q04725 743 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 STRN3Q13033 797 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 CUL4BQ13620 913 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 MYBPC2Q14324 1141 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 NFIL3Q16649 462 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 LRRC26Q2I0M4 334 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 HERC4Q5GLZ8 1057 aaPredicted RBP7.38□□□□□ -1.23
UPF3B-205ENST00000636792 L1TD1Q5T7N2 865 aaKnown RBP7.38□□□□□ -1.23
UPF3B-205ENST00000636792 DYMQ7RTS9 669 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 ZNF720Q7Z2F6 126 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 HAUS6Q7Z4H7 955 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 SFR1Q86XK3 245 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 RHPN2Q8IUC4 686 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 CCDC116Q8IYX3 515 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 GUF1Q8N442 669 aaKnown RBP7.38□□□□□ -1.23
UPF3B-205ENST00000636792 LRRC71Q8N4P6 559 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 MYCT1Q8N699 235 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 MLKLQ8NB16 471 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 RNF149Q8NC42 400 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 TMEM161BQ8NDZ6 487 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 ASAP3Q8TDY4 903 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 DNAJB3Q8WWF6 145 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 TMEM143Q96AN5 459 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 NLRP4Q96MN2 994 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 SCLT1Q96NL6 688 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 STRA6Q9BX79 667 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 PANK2Q9BZ23 570 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 CCDC113Q9H0I3 377 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 ADAMTS10Q9H324 1103 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 MRPL44Q9H9J2 332 aaKnown RBP7.38□□□□□ -1.23
UPF3B-205ENST00000636792 IFT122Q9HBG6 1241 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 TRMT13Q9NUP7 481 aaKnown RBP7.38□□□□□ -1.23
UPF3B-205ENST00000636792 ATP11BQ9Y2G3 1177 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 PCDHA5Q9Y5H7 936 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 NR2E3Q9Y5X4 410 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 CDY2AQ9Y6F7 541 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 PDCD11Q14690 1871 aaKnown RBP7.38□□□□□ -1.23
UPF3B-205ENST00000636792 CENPFP49454 3210 aa7.38□□□□□ -1.23
UPF3B-205ENST00000636792 A0A087WZ62 844 aa7.37□□□□□ -1.23
UPF3B-205ENST00000636792 BICDL2A1A5D9 508 aa7.37□□□□□ -1.23
UPF3B-205ENST00000636792 CCDC85CA6NKD9 419 aa7.37□□□□□ -1.23
UPF3B-205ENST00000636792 FIGNL2A6NMB9 653 aa7.37□□□□□ -1.23
UPF3B-205ENST00000636792 K7ERI5 159 aa7.37□□□□□ -1.23
UPF3B-205ENST00000636792 ACKR2O00590 384 aa7.37□□□□□ -1.23
UPF3B-205ENST00000636792 PSMA7O14818 248 aa7.37□□□□□ -1.23
UPF3B-205ENST00000636792 N4BP3O15049 544 aa7.37□□□□□ -1.23
UPF3B-205ENST00000636792 BAIAP3O94812 1187 aa7.37□□□□□ -1.23
UPF3B-205ENST00000636792 GCNT3O95395 438 aa7.37□□□□□ -1.23
UPF3B-205ENST00000636792 TIMP1P01033 207 aa7.37□□□□□ -1.23
UPF3B-205ENST00000636792 VTNP04004 478 aa7.37□□□□□ -1.23
UPF3B-205ENST00000636792 ERCC5P28715 1186 aaPredicted RBP7.37□□□□□ -1.23
UPF3B-205ENST00000636792 THPOP40225 353 aa7.37□□□□□ -1.23
UPF3B-205ENST00000636792 RGS19P49795 217 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms