RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 EP400Q96L91 3159 aa23.15■■□□□ 1.3
CLN5-215ENST00000636767 SPOPO43791 374 aa23.15■■□□□ 1.3
CLN5-215ENST00000636767 PDE6CP51160 858 aa23.15■■□□□ 1.3
CLN5-215ENST00000636767 LONRF1Q17RB8 773 aa23.15■■□□□ 1.3
CLN5-215ENST00000636767 SPICE1Q8N0Z3 855 aa23.15■■□□□ 1.3
CLN5-215ENST00000636767 ZNF564Q8TBZ8 553 aaPredicted RBP23.15■■□□□ 1.3
CLN5-215ENST00000636767 TCP11Q8WWU5 503 aa23.15■■□□□ 1.3
CLN5-215ENST00000636767 POP1Q99575 1024 aaKnown RBP23.15■■□□□ 1.3
CLN5-215ENST00000636767 LXNQ9BS40 222 aa23.15■■□□□ 1.3
CLN5-215ENST00000636767 IDI2Q9BXS1 227 aa23.15■■□□□ 1.3
CLN5-215ENST00000636767 ROPN1BQ9BZX4 212 aaPredicted RBP23.15■■□□□ 1.3
CLN5-215ENST00000636767 CDC42EP4Q9H3Q1 356 aaKnown RBP23.15■■□□□ 1.3
CLN5-215ENST00000636767 ROPN1Q9HAT0 212 aaPredicted RBP23.15■■□□□ 1.3
CLN5-215ENST00000636767 ATP6V0A4Q9HBG4 840 aa23.15■■□□□ 1.3
CLN5-215ENST00000636767 CD2APQ9Y5K6 639 aa23.15■■□□□ 1.3
CLN5-215ENST00000636767 ARHGEF35A5YM69 484 aa23.14■■□□□ 1.3
CLN5-215ENST00000636767 TP73O15350 636 aa23.14■■□□□ 1.3
CLN5-215ENST00000636767 CETN1Q12798 172 aa23.14■■□□□ 1.3
CLN5-215ENST00000636767 NUP85Q9BW27 656 aa23.14■■□□□ 1.3
CLN5-215ENST00000636767 ACP6Q9NPH0 428 aa23.14■■□□□ 1.3
CLN5-215ENST00000636767 AAASQ9NRG9 546 aa23.14■■□□□ 1.3
CLN5-215ENST00000636767 A0A1W2PRG0 241 aa23.14■■□□□ 1.29
CLN5-215ENST00000636767 CFAP73A6NFT4 308 aa23.14■■□□□ 1.29
CLN5-215ENST00000636767 P4HA2O15460 535 aa23.14■■□□□ 1.29
CLN5-215ENST00000636767 ECEL1O95672 775 aa23.14■■□□□ 1.29
CLN5-215ENST00000636767 LRRC14Q15048 493 aa23.14■■□□□ 1.29
CLN5-215ENST00000636767 RNF207Q6ZRF8 634 aa23.14■■□□□ 1.29
CLN5-215ENST00000636767 TRMT10CQ7L0Y3 403 aaKnown RBP23.14■■□□□ 1.29
CLN5-215ENST00000636767 MIGA2Q7L4E1 593 aa23.14■■□□□ 1.29
CLN5-215ENST00000636767 TBC1D1Q86TI0 1168 aaPredicted RBP23.14■■□□□ 1.29
CLN5-215ENST00000636767 KIAA0825Q8IV33 1275 aa23.14■■□□□ 1.29
CLN5-215ENST00000636767 KCNQ5Q9NR82 932 aa23.14■■□□□ 1.29
CLN5-215ENST00000636767 UBOX5O94941 541 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 GH2P01242 217 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 GZMAP12544 262 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 CALCOCO2Q13137 446 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 OTUD6AQ7L8S5 288 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 PLEKHO2Q8TD55 490 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 CBWD1Q9BRT8 395 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 HOMER3Q9NSC5 361 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 CYP1A2P05177 515 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 ARP10275 920 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 CEP55Q53EZ4 464 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 TLDC1Q6P9B6 456 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 FAM71AQ8IYT1 594 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 ZSWIM2Q8NEG5 633 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 MGARPQ8TDB4 240 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 TBC1D31Q96DN5 1066 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 ZNF577Q9BSK1 485 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 WDR11Q9BZH6 1224 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 LRRC19Q9H756 370 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.13■■□□□ 1.29
CLN5-215ENST00000636767 LOXHD1Q8IVV2 1947 aa23.13■■□□□ 1.29
CLN5-215ENST00000636767 ACSL3O95573 720 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 CLTAP09496 248 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 DLATP10515 647 aaKnown RBP23.12■■□□□ 1.29
CLN5-215ENST00000636767 CREB1P16220 341 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 MKRN4PQ13434 485 aaPredicted RBP23.12■■□□□ 1.29
CLN5-215ENST00000636767 RIPK1Q13546 671 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 VSTM1Q6UX27 236 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 B3GNT9Q6UX72 402 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 MAEAQ7L5Y9 396 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 KREMEN1Q96MU8 473 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 VEZTQ9HBM0 779 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 FGFR1OP2Q9NVK5 253 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 USP15Q9Y4E8 981 aaPredicted RBP23.12■■□□□ 1.29
CLN5-215ENST00000636767 ANKRD31Q8N7Z5 1873 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 TMEM120BA0PK00 339 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 G3V3G9 751 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 RWDD2BP57060 319 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 NCALDP61601 193 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 FMO1Q01740 532 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 RRP1BQ14684 758 aaKnown RBP23.12■■□□□ 1.29
CLN5-215ENST00000636767 DCAF8Q5TAQ9 597 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 PNMA8AQ86V59 439 aaPredicted RBP23.12■■□□□ 1.29
CLN5-215ENST00000636767 SLC47A2Q86VL8 602 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 DYDC1Q8WWB3 177 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 ARHGEF2Q92974 986 aaKnown RBP23.12■■□□□ 1.29
CLN5-215ENST00000636767 ZNF653Q96CK0 615 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 GGT7Q9UJ14 662 aa23.12■■□□□ 1.29
CLN5-215ENST00000636767 TCP11X1B4DZS4 312 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 CYP26A1O43174 497 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 RBM5P52756 815 aaKnown RBP eCLIP23.11■■□□□ 1.29
CLN5-215ENST00000636767 KRT17Q04695 432 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 RASA3Q14644 834 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 PSPC1Q8WXF1 523 aaKnown RBP23.11■■□□□ 1.29
CLN5-215ENST00000636767 SLCO2A1Q92959 643 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 WHRNQ9P202 907 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 ZNFX1Q9P2E3 1918 aaKnown RBP23.11■■□□□ 1.29
CLN5-215ENST00000636767 CLDN3O15551 220 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 POLR2MP0CAP2 368 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 CHKAP35790 457 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 LLGL1Q15334 1064 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 RHBDF2Q6PJF5 856 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 PADI6Q6TGC4 694 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 CRELD2Q6UXH1 353 aaPredicted RBP23.11■■□□□ 1.29
CLN5-215ENST00000636767 SERPINB12Q96P63 405 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 TMEM117Q9H0C3 514 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 DBNDD1Q9H9R9 158 aa23.11■■□□□ 1.29
CLN5-215ENST00000636767 GTF3C4Q9UKN8 822 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms