RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 SLC27A1Q6PCB7 646 aa20.3■□□□□ 0.84
CLN6-214ENST00000636314 KREMEN2Q8NCW0 462 aa20.3■□□□□ 0.84
CLN6-214ENST00000636314 KIFAP3Q92845 792 aa20.3■□□□□ 0.84
CLN6-214ENST00000636314 SNX27Q96L92 541 aa20.3■□□□□ 0.84
CLN6-214ENST00000636314 IFT74Q96LB3 600 aa20.3■□□□□ 0.84
CLN6-214ENST00000636314 FAM193BQ96PV7 902 aaPredicted RBP20.3■□□□□ 0.84
CLN6-214ENST00000636314 APOL6Q9BWW8 343 aa20.3■□□□□ 0.84
CLN6-214ENST00000636314 KANSL3Q9P2N6 904 aa20.3■□□□□ 0.84
CLN6-214ENST00000636314 HES2Q9Y543 173 aa20.3■□□□□ 0.84
CLN6-214ENST00000636314 H0Y858 1186 aa20.29■□□□□ 0.84
CLN6-214ENST00000636314 NPTXRO95502 500 aa20.29■□□□□ 0.84
CLN6-214ENST00000636314 MLH1P40692 756 aa20.29■□□□□ 0.84
CLN6-214ENST00000636314 MAPK6Q16659 721 aa20.29■□□□□ 0.84
CLN6-214ENST00000636314 FAM187BQ17R55 369 aa20.29■□□□□ 0.84
CLN6-214ENST00000636314 CDR2LQ86X02 465 aaPredicted RBP20.29■□□□□ 0.84
CLN6-214ENST00000636314 MMTAG2Q9BU76 263 aaKnown RBP20.29■□□□□ 0.84
CLN6-214ENST00000636314 NXF3Q9H4D5 531 aaKnown RBP20.29■□□□□ 0.84
CLN6-214ENST00000636314 POMKQ9H5K3 350 aa20.29■□□□□ 0.84
CLN6-214ENST00000636314 DNAJB4Q9UDY4 337 aa20.29■□□□□ 0.84
CLN6-214ENST00000636314 HCFC2Q9Y5Z7 792 aa20.29■□□□□ 0.84
CLN6-214ENST00000636314 C2CD4DB7Z1M9 353 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 BMP15O95972 392 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 POMCP01189 267 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 PRKCBP05771 671 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 GALTP07902 379 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 LIG1P18858 919 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 SLC11A1P49279 550 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 AFF1P51825 1210 aaKnown RBP20.28■□□□□ 0.84
CLN6-214ENST00000636314 MTMR3Q13615 1198 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 BMS1Q14692 1282 aaKnown RBP20.28■□□□□ 0.84
CLN6-214ENST00000636314 TMEM173Q86WV6 379 aaPredicted RBP20.28■□□□□ 0.84
CLN6-214ENST00000636314 ZNF280BQ86YH2 543 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 IGSF21Q96ID5 467 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 CDK5RAP3Q96JB5 506 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 NECTIN4Q96NY8 510 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 KIFC3Q9BVG8 833 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 FZD8Q9H461 694 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 SORCS3Q9UPU3 1222 aa20.28■□□□□ 0.84
CLN6-214ENST00000636314 A0A1B0GUA9 196 aa20.27■□□□□ 0.84
CLN6-214ENST00000636314 C2orf71A6NGG8 1288 aa20.27■□□□□ 0.84
CLN6-214ENST00000636314 K7ELQ4 463 aaPredicted RBP20.27■□□□□ 0.84
CLN6-214ENST00000636314 N4BP3O15049 544 aa20.27■□□□□ 0.84
CLN6-214ENST00000636314 B4GALT3O60512 393 aa20.27■□□□□ 0.84
CLN6-214ENST00000636314 PRPF4BQ13523 1007 aaKnown RBP20.27■□□□□ 0.84
CLN6-214ENST00000636314 UBALD2Q8IYN6 164 aa20.27■□□□□ 0.84
CLN6-214ENST00000636314 MRPL43Q8N983 215 aaKnown RBP20.27■□□□□ 0.84
CLN6-214ENST00000636314 GAD1Q99259 594 aa20.27■□□□□ 0.84
CLN6-214ENST00000636314 TMEM175Q9BSA9 504 aa20.27■□□□□ 0.84
CLN6-214ENST00000636314 CCDC113Q9H0I3 377 aa20.27■□□□□ 0.84
CLN6-214ENST00000636314 NT5C3AQ9H0P0 336 aa20.27■□□□□ 0.84
CLN6-214ENST00000636314 RNF39Q9H2S5 420 aa20.27■□□□□ 0.84
CLN6-214ENST00000636314 ADAM7Q9H2U9 754 aa20.27■□□□□ 0.84
CLN6-214ENST00000636314 POLD4Q9HCU8 107 aa20.27■□□□□ 0.84
CLN6-214ENST00000636314 GIT1Q9Y2X7 761 aa20.27■□□□□ 0.84
CLN6-214ENST00000636314 ZFHX2Q9C0A1 2572 aaPredicted RBP20.26■□□□□ 0.83
CLN6-214ENST00000636314 ARL5CA6NH57 179 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 CLASP2O75122 1294 aaKnown RBP20.26■□□□□ 0.83
CLN6-214ENST00000636314 DDHD2O94830 711 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 SSBP05455 408 aaKnown RBP eCLIP20.26■□□□□ 0.83
CLN6-214ENST00000636314 MTHFRP42898 656 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 EFNA5P52803 228 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 ITIH3Q06033 890 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 HYIQ5T013 277 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 RARS2Q5T160 578 aaKnown RBP20.26■□□□□ 0.83
CLN6-214ENST00000636314 KCNK18Q7Z418 384 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 VPS52Q8N1B4 723 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 TMEM87AQ8NBN3 555 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 BCL7CQ8WUZ0 217 aaPredicted RBP20.26■□□□□ 0.83
CLN6-214ENST00000636314 INTS4Q96HW7 963 aaKnown RBP20.26■□□□□ 0.83
CLN6-214ENST00000636314 AK8Q96MA6 479 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 DRC1Q96MC2 740 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 ZFP42Q96MM3 310 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 RUSC1Q9BVN2 902 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 GTF3C3Q9Y5Q9 886 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 MYH11P35749 1972 aa20.26■□□□□ 0.83
CLN6-214ENST00000636314 ZMYM2Q9UBW7 1377 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 DENND4AQ7Z401 1863 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 ACKR2O00590 384 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 INPPL1O15357 1258 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 GALR2O43603 387 aaPredicted RBP20.25■□□□□ 0.83
CLN6-214ENST00000636314 HIP1RO75146 1068 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 BRD1O95696 1058 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 CXCL14O95715 111 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 WEE2P0C1S8 567 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 AKAP5P24588 427 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 SCNN1GP51170 649 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 DMP1Q13316 513 aaPredicted RBP20.25■□□□□ 0.83
CLN6-214ENST00000636314 RINT1Q6NUQ1 792 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 DDX53Q86TM3 631 aaKnown RBP20.25■□□□□ 0.83
CLN6-214ENST00000636314 CABP7Q86V35 215 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 KCTD17Q8N5Z5 321 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 PNMA5Q96PV4 448 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 PLIN2Q99541 437 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 ADPGKQ9BRR6 497 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 ZBP1Q9H171 429 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 PDZD7Q9H5P4 517 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 PARP2Q9UGN5 583 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 FAN1Q9Y2M0 1017 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 CACNA1HO95180 2353 aa20.25■□□□□ 0.83
CLN6-214ENST00000636314 PHLPP2Q6ZVD8 1323 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms