RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 MAPK8IP1Q9UQF2 711 aa6.34□□□□□ -1.39
SCN1A-212ENST00000636194 PGRMC1O00264 195 aaKnown RBP6.34□□□□□ -1.4
SCN1A-212ENST00000636194 PODXLO00592 558 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 FOXO3O43524 673 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 TLR2O60603 784 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 HUS1O60921 280 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 PSMA2P25787 234 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 PSMC2P35998 433 aaKnown RBP6.34□□□□□ -1.4
SCN1A-212ENST00000636194 ZNF235Q14590 738 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 TAB1Q15750 504 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 ERAP2Q6P179 960 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 SPATA5Q8NB90 893 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 PCYOX1LQ8NBM8 494 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 DYDC2Q96IM9 177 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 FAM167BQ9BTA0 163 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 STK33Q9BYT3 514 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 RNPEPQ9H4A4 650 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 SERHL2Q9H4I8 314 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 SERHLQ9NQF3 203 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 SH3BP4Q9P0V3 963 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 PLCH2O75038 1416 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 EVPLLA8MZ36 301 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.34□□□□□ -1.4
SCN1A-212ENST00000636194 MYO1CO00159 1063 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 NFICP08651 508 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 ALAS1P13196 640 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 TFCP2Q12800 502 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 TSPAN14Q8NG11 270 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 ATL2Q8NHH9 583 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 TDRD7Q8NHU6 1098 aaKnown RBP6.34□□□□□ -1.4
SCN1A-212ENST00000636194 RHPN1Q8TCX5 695 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 THAP11Q96EK4 314 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 AMNQ9BXJ7 453 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 TRIM39Q9HCM9 518 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 KMT5AQ9NQR1 393 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 PARVAQ9NVD7 372 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 POLR1DQ9Y2S0 133 aa6.34□□□□□ -1.4
SCN1A-212ENST00000636194 WARSP23381 471 aaKnown RBP6.33□□□□□ -1.4
SCN1A-212ENST00000636194 AKT1P31749 480 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 MTTPP55157 894 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 COX10Q12887 443 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 NNTQ13423 1086 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 CLCA4Q14CN2 919 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 IZUMO3Q5VZ72 239 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 COLGALT2Q8IYK4 626 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 ZNF248Q8NDW4 579 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 CABLES1Q8TDN4 633 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 OMA1Q96E52 524 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 MRPL1Q9BYD6 325 aaKnown RBP6.33□□□□□ -1.4
SCN1A-212ENST00000636194 SLITRK2Q9H156 845 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 SMYD3Q9H7B4 428 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 CCNL1Q9UK58 526 aaPredicted RBP6.33□□□□□ -1.4
SCN1A-212ENST00000636194 FHOD1Q9Y613 1164 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 MYH2Q9UKX2 1941 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 GOLGA8SH3BPF8 625 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 CPA3P15088 417 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 GUCY1A2P33402 732 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 HSD17B4P51659 736 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 AP3B2Q13367 1082 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 RASSF6Q6ZTQ3 369 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 TAS2R42Q7RTR8 314 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 CYP4Z2PQ8N1L4 340 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 CLEC4FQ8N1N0 589 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 ARHGAP45Q92619 1136 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 ACCSQ96QU6 501 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 RAD21L1Q9H4I0 556 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 ATP6V1HQ9UI12 483 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 PPIEQ9UNP9 301 aaKnown RBP6.33□□□□□ -1.4
SCN1A-212ENST00000636194 ZMYND10O75800 440 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 MBD4O95243 580 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 KLHL38Q2WGJ6 581 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 CERKLQ49MI3 558 aaPredicted RBP6.33□□□□□ -1.4
SCN1A-212ENST00000636194 MIIPQ5JXC2 388 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 EFL1Q7Z2Z2 1120 aaKnown RBP6.33□□□□□ -1.4
SCN1A-212ENST00000636194 CYP4Z1Q86W10 505 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 SSH1Q8WYL5 1049 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 MCCC1Q96RQ3 725 aaPredicted RBP6.33□□□□□ -1.4
SCN1A-212ENST00000636194 NOP53Q9NZM5 478 aaKnown RBP6.33□□□□□ -1.4
SCN1A-212ENST00000636194 GCNT4Q9P109 453 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 MAFFQ9ULX9 164 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 H0Y3Z8 333 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 ASMTLO95671 621 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 LYNP07948 512 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 ITGA3P26006 1051 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 FANCCQ00597 558 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 ARMC3Q5W041 872 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 POTEAQ6S8J7 498 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 ARHGAP27Q6ZUM4 889 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 RAB11FIP2Q7L804 512 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 RHPN2Q8IUC4 686 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 CAMKK1Q8N5S9 505 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 RBM41Q96IZ5 413 aaKnown RBP6.33□□□□□ -1.4
SCN1A-212ENST00000636194 HMG20AQ9NP66 347 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 RAB23Q9ULC3 237 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 FANCD2Q9BXW9 1451 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 ATP10DQ9P241 1426 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 A0A1W2PRG6 482 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 CCDC22O60826 627 aa6.33□□□□□ -1.4
SCN1A-212ENST00000636194 RBMXL2O75526 392 aaKnown RBP6.33□□□□□ -1.4
SCN1A-212ENST00000636194 LDHAP00338 332 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms