RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.64	□□□□□ -1.67
UBE2A-208	ENST00000628734	SMC1B	Q8NDV3	1235 aa		4.64	□□□□□ -1.67
UBE2A-208	ENST00000628734	CHTF18	Q8WVB6	975 aa		4.64	□□□□□ -1.67
UBE2A-208	ENST00000628734	LSM14B	Q9BX40	385 aa	Known RBP	4.64	□□□□□ -1.67
UBE2A-208	ENST00000628734	PCGF6	Q9BYE7	350 aa		4.64	□□□□□ -1.67
UBE2A-208	ENST00000628734	IFT57	Q9NWB7	429 aa		4.64	□□□□□ -1.67
UBE2A-208	ENST00000628734	MSRA	Q9UJ68	235 aa		4.64	□□□□□ -1.67
UBE2A-208	ENST00000628734	ST20-MTHFS	A0A0A6YYL1	179 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	ZAR1L	A6NP61	321 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	VGLL3	A8MV65	326 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	ANP32C	O43423	234 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	RECQL4	O94761	1208 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	RHOBTB3	O94955	611 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	ABHD16A	O95870	558 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	GYPE	P15421	78 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	VPS72	Q15906	364 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	LONRF3	Q496Y0	759 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	IQSEC1	Q6DN90	963 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	TAS1R1	Q7RTX1	841 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	PASD1	Q8IV76	773 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	NXPE1	Q8N323	547 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	MSL3	Q8N5Y2	521 aa	Known RBP	4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	ZNF610	Q8N9Z0	462 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	PROKR1	Q8TCW9	393 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	NINJ1	Q92982	152 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	FERMT2	Q96AC1	680 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	IL17RA	Q96F46	866 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	RNPC3	Q96LT9	517 aa	Known RBP	4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	WNT8A	Q9H1J5	351 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	KCNH6	Q9H252	994 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	THG1L	Q9NWX6	298 aa	Known RBP	4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	PACSIN3	Q9UKS6	424 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	SORCS3	Q9UPU3	1222 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734	CD2AP	Q9Y5K6	639 aa		4.63	□□□□□ -1.67
UBE2A-208	ENST00000628734		A0A1W2PR48	441 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	GOLGA6C	A6NDK9	693 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	GOLGA6B	A6NDN3	693 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	AHRR	A9YTQ3	701 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	PROB1	E7EW31	1015 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	NRP2	O60462	931 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	DNAJC6	O75061	913 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	PEX14	O75381	377 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	MAP4K4	O95819	1239 aa	Predicted RBP	4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	GOLGA6D	P0CG33	693 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	SCP2	P22307	547 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	CASR	P41180	1078 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	GZMK	P49863	264 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	HDAC1	Q13547	482 aa	Predicted RBP	4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	TKFC	Q3LXA3	575 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	CCDC144B	Q3MJ40	725 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	GPRIN1	Q7Z2K8	1008 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	FAM83A	Q86UY5	434 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	HOMER1	Q86YM7	354 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	SLC41A1	Q8IVJ1	513 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	FAM43A	Q8N2R8	423 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	CPT1C	Q8TCG5	803 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	MORC4	Q8TE76	937 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	GAB3	Q8WWW8	586 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	MYEOV	Q96EZ4	313 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	SLC46A2	Q9BY10	475 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	UBA5	Q9GZZ9	404 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	ZNF768	Q9H5H4	540 aa	Known RBP	4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	GOLGA6A	Q9NYA3	693 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	TMPRSS11E	Q9UL52	423 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	NUMBL	Q9Y6R0	609 aa		4.62	□□□□□ -1.67
UBE2A-208	ENST00000628734	DHX16	O60231	1041 aa	Known RBP	4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	SCAF4	O95104	1147 aa	Known RBP	4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	CD38	P28907	300 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	ANP32A	P39687	249 aa	Known RBP	4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	NEK4	P51957	841 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	KPNA1	P52294	538 aa	Predicted RBP	4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	RHBDL3	P58872	404 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	PTPA	Q15257	358 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	TERF2	Q15554	542 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	SEPT7	Q16181	437 aa	Known RBP	4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	ZNF280D	Q6N043	979 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	KCNV1	Q6PIU1	500 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	C16orf86	Q6ZW13	317 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	LYSMD2	Q8IV50	215 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	PPM1K	Q8N3J5	372 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	OR5M3	Q8NGP4	307 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	UBXN4	Q92575	508 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	NDC1	Q9BTX1	674 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	TOR3A	Q9H497	397 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	PIF1	Q9H611	641 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	PNMA2	Q9UL42	364 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	CHST2	Q9Y4C5	530 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	PPP2R3B	Q9Y5P8	575 aa		4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	POLR2A	P24928	1970 aa	Known RBP	4.61	□□□□□ -1.67
UBE2A-208	ENST00000628734	PRSS38	A1L453	326 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	EXOC5	O00471	708 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	B3GALT2	O43825	422 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	ZNF500	O60304	480 aa	Predicted RBP	4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	RAB11FIP3	O75154	756 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	LAG3	P18627	525 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	LSP1	P33241	339 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms