RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ASIC4Q96FT7 647 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 BTBD6Q96KE9 485 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 GJD4Q96KN9 370 aaPredicted RBP13.58□□□□□ -0.24
SCN8A-209ENST00000627620 PLA2G12BQ9BX93 195 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 ASAP2O43150 1006 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 PRAMEP78395 509 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 CAPRIN1Q14444 709 aaKnown RBP13.58□□□□□ -0.24
SCN8A-209ENST00000627620 ACCSLQ4AC99 568 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 SMYD3Q9H7B4 428 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 TRIM33Q9UPN9 1127 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.58□□□□□ -0.24
SCN8A-209ENST00000627620 IFNA8P32881 189 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 MORF4L2Q15014 288 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 IZUMO3Q5VZ72 239 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 ATP11CQ8NB49 1132 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 ZC3H15Q8WU90 426 aaKnown RBP13.57□□□□□ -0.24
SCN8A-209ENST00000627620 HPS3Q969F9 1004 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 DCTN4Q9UJW0 460 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 E2F6O75461 281 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 ATP1A1P05023 1023 aaKnown RBP13.57□□□□□ -0.24
SCN8A-209ENST00000627620 ZNF543Q08ER8 600 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 TMEM259Q4ZIN3 620 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 RNF168Q8IYW5 571 aaPredicted RBP13.57□□□□□ -0.24
SCN8A-209ENST00000627620 TRIML2Q8N7C3 387 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 RAPGEF5Q92565 580 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 TRIM9Q9C026 710 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 FLT1P17948 1338 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 GGPS1O95749 300 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 PYGBP11216 843 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 ZFXP17010 805 aaPredicted RBP13.57□□□□□ -0.24
SCN8A-209ENST00000627620 COG2Q14746 738 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 ZC3H18Q86VM9 953 aaKnown RBP13.57□□□□□ -0.24
SCN8A-209ENST00000627620 OR6P1Q8NGX9 317 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 SLC13A1Q9BZW2 595 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 WDR72Q3MJ13 1102 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 SMIM5Q71RC9 77 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 SPATA17Q96L03 361 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 PHF20Q9BVI0 1012 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 ZDHHC9Q9Y397 364 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 H0Y3Z8 333 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 SLC16A3O15427 465 aaKnown RBP13.57□□□□□ -0.24
SCN8A-209ENST00000627620 PFDN1O60925 122 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 ATP5HO75947 161 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 HAUS5O94927 633 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 LMNAP02545 664 aaKnown RBP13.57□□□□□ -0.24
SCN8A-209ENST00000627620 TNIP3Q96KP6 325 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 EGFL8Q99944 293 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 HSPBP1Q9NZL4 362 aa13.57□□□□□ -0.24
SCN8A-209ENST00000627620 DFFAO00273 331 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 STK25O00506 426 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 APOL1O14791 398 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 DIAPH2O60879 1101 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 RTN2O75298 545 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 SCP2P22307 547 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 CCSER1Q9C0I3 900 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 PIN4Q9Y237 131 aaKnown RBP13.56□□□□□ -0.24
SCN8A-209ENST00000627620 LAMC1P11047 1609 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 DCAF4L1Q3SXM0 396 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 NUDCD3Q8IVD9 361 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 TGS1Q96RS0 853 aaKnown RBP13.56□□□□□ -0.24
SCN8A-209ENST00000627620 ZNRF3Q9ULT6 936 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 UBA6A0AVT1 1052 aaPredicted RBP13.56□□□□□ -0.24
SCN8A-209ENST00000627620 EEF1DP29692 281 aaKnown RBP13.56□□□□□ -0.24
SCN8A-209ENST00000627620 KCNA1Q09470 495 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 LBRQ14739 615 aaKnown RBP13.56□□□□□ -0.24
SCN8A-209ENST00000627620 STRIP1Q5VSL9 837 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 TAS2R42Q7RTR8 314 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 PID1Q7Z2X4 250 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 MICALL2Q8IY33 904 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 OR6J1Q8NGC5 347 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 SH2D3AQ9BRG2 576 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 TIPINQ9BVW5 301 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 PIDD1Q9HB75 910 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.56□□□□□ -0.24
SCN8A-209ENST00000627620 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.56□□□□□ -0.24
SCN8A-209ENST00000627620 GMNCA6NCL1 334 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 FAM205CA6NFA0 338 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 ARSEP51690 589 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 CDK17Q00537 523 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 EN1Q05925 392 aaPredicted RBP13.56□□□□□ -0.24
SCN8A-209ENST00000627620 CRAMP1Q96RY5 1269 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 POLR3CQ9BUI4 534 aaPredicted RBP13.56□□□□□ -0.24
SCN8A-209ENST00000627620 TRIM62Q9BVG3 475 aa13.56□□□□□ -0.24
SCN8A-209ENST00000627620 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.56□□□□□ -0.24
SCN8A-209ENST00000627620 LIMA1Q9UHB6 759 aaKnown RBP13.56□□□□□ -0.24
SCN8A-209ENST00000627620 FARP1Q9Y4F1 1045 aaPredicted RBP13.56□□□□□ -0.24
SCN8A-209ENST00000627620 KIAA0391O15091 583 aaKnown RBP13.55□□□□□ -0.24
SCN8A-209ENST00000627620 DGAT1O75907 488 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 TMCC1O94876 653 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 ARFIP2P53365 341 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 KRT17Q04695 432 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 BAATQ14032 418 aaPredicted RBP13.55□□□□□ -0.24
SCN8A-209ENST00000627620 NCAPHQ15003 741 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 C1orf146Q5VVC0 180 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 RNF135Q8IUD6 432 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 RNPC3Q96LT9 517 aaKnown RBP13.55□□□□□ -0.24
SCN8A-209ENST00000627620 RALAP11233 206 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 TYK2P29597 1187 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 DHX34Q14147 1143 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms