RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 CSF2RAP15509 400 aa11.58□□□□□ -0.55
KCNMA1-225ENST00000626620 MRPL10Q7Z7H8 261 aaKnown RBP11.58□□□□□ -0.55
KCNMA1-225ENST00000626620 CXCL16Q9H2A7 254 aa11.58□□□□□ -0.55
KCNMA1-225ENST00000626620 TSPYL2Q9H2G4 693 aaPredicted RBP11.58□□□□□ -0.55
KCNMA1-225ENST00000626620 TMEM206Q9H813 350 aa11.58□□□□□ -0.55
KCNMA1-225ENST00000626620 RNF19AQ9NV58 838 aa11.58□□□□□ -0.55
KCNMA1-225ENST00000626620 TYW1Q9NV66 732 aaKnown RBP11.58□□□□□ -0.55
KCNMA1-225ENST00000626620 RWDD2AQ9UIY3 292 aa11.58□□□□□ -0.55
KCNMA1-225ENST00000626620 RPS6KA5O75582 802 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 CCNE1P24864 410 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 WNT7BP56706 349 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 ZBTB41Q5SVQ8 909 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 ALKAL1Q6UXT8 129 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 CBWD1Q9BRT8 395 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 MRPL4Q9BYD3 311 aaKnown RBP11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 INO80BQ9C086 356 aaPredicted RBP11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 CDT1Q9H211 546 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 C9IYK1 514 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 INO80B-WBP1J3KQ70 363 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 TOM1L1O75674 476 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 ERCC5P28715 1186 aaPredicted RBP11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 PRPF4BQ13523 1007 aaKnown RBP11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 STX1AQ16623 288 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 NELFCDQ8IXH7 590 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 DBF4BQ8NFT6 615 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 BADQ92934 168 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 P2RX5Q93086 422 aa11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 UBE2OQ9C0C9 1292 aaKnown RBP11.58□□□□□ -0.56
KCNMA1-225ENST00000626620 GPR182O15218 404 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 AP5Z1O43299 807 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 GARTP22102 1010 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 SFPQP23246 707 aaKnown RBP eCLIP11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 MYBPC2Q14324 1141 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 EDRF1Q3B7T1 1238 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 XKR4Q5GH76 650 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 ATF7IP2Q5U623 682 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 TMEM192Q8IY95 271 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 TRIM44Q96DX7 344 aaPredicted RBP11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 IFIH1Q9BYX4 1025 aaKnown RBP11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 INPPL1O15357 1258 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 ZNF623O75123 536 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 C9orf50Q5SZB4 431 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 MPZL3Q6UWV2 235 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 PLEKHO2Q8TD55 490 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 CCDC51Q96ER9 411 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 CGNQ9P2M7 1197 aaKnown RBP11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 A0A0C4DFX4 3053 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 ENPP3O14638 875 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 SMAD3P84022 425 aaKnown RBP11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 ANO6Q4KMQ2 910 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 C1orf220Q5T0J3 134 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 CDR2LQ86X02 465 aaPredicted RBP11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 NELFBQ8WX92 580 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 GBP3Q9H0R5 595 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 DNAJC25Q9H1X3 360 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 IL23AQ9NPF7 189 aa11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 CPSF3Q9UKF6 684 aaKnown RBP11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 TDRD15B5MCY1 1934 aaKnown RBP11.57□□□□□ -0.56
KCNMA1-225ENST00000626620 M0QZ92 97 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 PPP1R2P41236 205 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 PAK2Q13177 524 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 APTXQ7Z2E3 356 aaKnown RBP11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 GSTCDQ8NEC7 633 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 APBB2Q92870 758 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 RC3H2Q9HBD1 1191 aaKnown RBP11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 ANO10Q9NW15 660 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 GINS2Q9Y248 185 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 MEIS3P2A8K0S8 358 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 LRRC63Q05C16 580 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 SHHQ15465 462 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 CNKSR3Q6P9H4 555 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 SLC27A1Q6PCB7 646 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 CATSPER4Q7RTX7 472 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 CEP120Q8N960 986 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 ENOX1Q8TC92 643 aaKnown RBP11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 CTNND2Q9UQB3 1225 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 A0A0U1RQF3 1178 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 MCF2P10911 925 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 ZNF18P17022 549 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 MARSP56192 900 aaKnown RBP11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 CLDN10P78369 228 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 NAB2Q15742 525 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 TMEM240Q5SV17 173 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 CDKAL1Q5VV42 579 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 Q7L0L9 218 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 RNF39Q9H2S5 420 aa11.56□□□□□ -0.56
KCNMA1-225ENST00000626620 CASP4P49662 377 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 PAK1Q13153 545 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 NOTUMQ6P988 496 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 CCDC47Q96A33 483 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 TTYH1Q9H313 450 aaPredicted RBP11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 TSPY26PQ9H489 355 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 N4BP3O15049 544 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 MAPK13O15264 365 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 AKAP3O75969 853 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 PFKMP08237 780 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 RAG1P15918 1043 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 TNFSF9P41273 254 aa11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 POU5F1Q01860 360 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-225ENST00000626620 STRN3Q13033 797 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms