RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 INF2Q27J81 1249 aa16.37■□□□□ 0.21
PNKP-218ENST00000625299 RSPO4Q2I0M5 234 aaPredicted RBP16.37■□□□□ 0.21
PNKP-218ENST00000625299 USP41Q3LFD5 358 aa16.37■□□□□ 0.21
PNKP-218ENST00000625299 NOTUMQ6P988 496 aa16.37■□□□□ 0.21
PNKP-218ENST00000625299 GRASPQ7Z6J2 395 aaPredicted RBP16.37■□□□□ 0.21
PNKP-218ENST00000625299 FERMT3Q86UX7 667 aa16.37■□□□□ 0.21
PNKP-218ENST00000625299 EXOC8Q8IYI6 725 aa16.37■□□□□ 0.21
PNKP-218ENST00000625299 BLIDQ8IZY5 108 aa16.37■□□□□ 0.21
PNKP-218ENST00000625299 TCP11Q8WWU5 503 aa16.37■□□□□ 0.21
PNKP-218ENST00000625299 SHDQ96IW2 340 aa16.37■□□□□ 0.21
PNKP-218ENST00000625299 LXNQ9BS40 222 aa16.37■□□□□ 0.21
PNKP-218ENST00000625299 RPP25Q9BUL9 199 aaKnown RBP16.37■□□□□ 0.21
PNKP-218ENST00000625299 GPR62Q9BZJ7 368 aa16.37■□□□□ 0.21
PNKP-218ENST00000625299 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.37■□□□□ 0.21
PNKP-218ENST00000625299 CHST7Q9NS84 486 aa16.37■□□□□ 0.21
PNKP-218ENST00000625299 NCDNQ9UBB6 729 aa16.37■□□□□ 0.21
PNKP-218ENST00000625299 VAV3Q9UKW4 847 aa16.37■□□□□ 0.21
PNKP-218ENST00000625299 CDC45O75419 566 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 ZMYND10O75800 440 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 EFEMP2O95967 443 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 P4HBP07237 508 aaKnown RBP16.36■□□□□ 0.21
PNKP-218ENST00000625299 RPS6KB1P23443 525 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 AKAP5P24588 427 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 YWHABP31946 246 aaKnown RBP16.36■□□□□ 0.21
PNKP-218ENST00000625299 GPC5P78333 572 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 NTHL1P78549 312 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 SSRP1Q08945 709 aaKnown RBP16.36■□□□□ 0.21
PNKP-218ENST00000625299 PPP2R5CQ13362 524 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 UBXN2BQ14CS0 331 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 XKR9Q5GH70 373 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 MOXD1Q6UVY6 613 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 PRSS55Q6UWB4 352 aaPredicted RBP16.36■□□□□ 0.21
PNKP-218ENST00000625299 PARM1Q6UWI2 310 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 FGF14Q92915 247 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 MBOAT7Q96N66 472 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 MTRQ99707 1265 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 BCO2Q9BYV7 579 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 CSRNP2Q9H175 543 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 NXF3Q9H4D5 531 aaKnown RBP16.36■□□□□ 0.21
PNKP-218ENST00000625299 CACNG4Q9UBN1 327 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 POLIQ9UNA4 740 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 SNX14Q9Y5W7 946 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 CACNA1BQ00975 2339 aa16.36■□□□□ 0.21
PNKP-218ENST00000625299 GPR179Q6PRD1 2367 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 ASAP2O43150 1006 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 LAMTOR5O43504 91 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 MARCH6O60337 910 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 TADA2AO75478 443 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 PDIA3P30101 505 aaKnown RBP16.35■□□□□ 0.21
PNKP-218ENST00000625299 AXLP30530 894 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 STARD6P59095 220 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 CREMQ03060 361 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 NCAPH2Q6IBW4 605 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 HACE1Q8IYU2 909 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 MAML2Q8IZL2 1156 aaPredicted RBP16.35■□□□□ 0.21
PNKP-218ENST00000625299 SUMF1Q8NBK3 374 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 HASPINQ8TF76 798 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 CCDC51Q96ER9 411 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 DLL3Q9NYJ7 618 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 KLK14Q9P0G3 267 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 FNIP2Q9P278 1114 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 ADAM28Q9UKQ2 775 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 PPME1Q9Y570 386 aa16.35■□□□□ 0.21
PNKP-218ENST00000625299 PATJQ8NI35 1801 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 KANSL1LA0AUZ9 987 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 M0R2N6 131 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 CPLX1O14810 134 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 NPTXRO95502 500 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 CYP4A11Q02928 519 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 CSTF1Q05048 431 aaKnown RBP16.34■□□□□ 0.21
PNKP-218ENST00000625299 CTTNQ14247 550 aaKnown RBP16.34■□□□□ 0.21
PNKP-218ENST00000625299 MLF2Q15773 248 aaPredicted RBP16.34■□□□□ 0.21
PNKP-218ENST00000625299 LIN9Q5TKA1 542 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 LILRA6Q6PI73 481 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 OTUD6AQ7L8S5 288 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 KRT25Q7Z3Z0 450 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 CDR2LQ86X02 465 aaPredicted RBP16.34■□□□□ 0.21
PNKP-218ENST00000625299 AIFM3Q96NN9 605 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 CNTNAP3BQ96NU0 1288 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 CNTNAP3Q9BZ76 1288 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 RGL1Q9NZL6 768 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 PARP2Q9UGN5 583 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 CDH7Q9ULB5 785 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 GIT1Q9Y2X7 761 aa16.34■□□□□ 0.21
PNKP-218ENST00000625299 ZBTB39O15060 712 aa16.33■□□□□ 0.2
PNKP-218ENST00000625299 CCL16O15467 120 aa16.33■□□□□ 0.2
PNKP-218ENST00000625299 DEXIO95424 95 aa16.33■□□□□ 0.2
PNKP-218ENST00000625299 PAPLNO95428 1278 aa16.33■□□□□ 0.2
PNKP-218ENST00000625299 ARF4P18085 180 aaPredicted RBP16.33■□□□□ 0.2
PNKP-218ENST00000625299 PTENP60484 403 aa16.33■□□□□ 0.2
PNKP-218ENST00000625299 GRIK3Q13003 919 aa16.33■□□□□ 0.2
PNKP-218ENST00000625299 TFDP1Q14186 410 aa16.33■□□□□ 0.2
PNKP-218ENST00000625299 RTP2Q5QGT7 225 aa16.33■□□□□ 0.2
PNKP-218ENST00000625299 PPM1LQ5SGD2 360 aa16.33■□□□□ 0.2
PNKP-218ENST00000625299 VARS2Q5ST30 1063 aaKnown RBP16.33■□□□□ 0.2
PNKP-218ENST00000625299 MTSS1LQ765P7 747 aa16.33■□□□□ 0.2
PNKP-218ENST00000625299 CEP57Q86XR8 500 aa16.33■□□□□ 0.2
PNKP-218ENST00000625299 C4orf19Q8IY42 314 aa16.33■□□□□ 0.2
PNKP-218ENST00000625299 DAGLBQ8NCG7 672 aa16.33■□□□□ 0.2
PNKP-218ENST00000625299 DYDC2Q96IM9 177 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms