RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 C4orf32Q8N8J7 132 aa17.22■□□□□ 0.35
ATRX-217ENST00000624668 FBXO18Q8NFZ0 1043 aa17.22■□□□□ 0.35
ATRX-217ENST00000624668 RABGGTAQ92696 567 aa17.22■□□□□ 0.35
ATRX-217ENST00000624668 RPS6KC1Q96S38 1066 aa17.22■□□□□ 0.35
ATRX-217ENST00000624668 EMILIN2Q9BXX0 1053 aa17.22■□□□□ 0.35
ATRX-217ENST00000624668 CXCL16Q9H2A7 254 aa17.22■□□□□ 0.35
ATRX-217ENST00000624668 FOXP1Q9H334 677 aaPredicted RBP17.22■□□□□ 0.35
ATRX-217ENST00000624668 SFXN1Q9H9B4 322 aa17.22■□□□□ 0.35
ATRX-217ENST00000624668 MRPL17Q9NRX2 175 aaKnown RBP17.22■□□□□ 0.35
ATRX-217ENST00000624668 KLK14Q9P0G3 267 aa17.22■□□□□ 0.35
ATRX-217ENST00000624668 CACNG4Q9UBN1 327 aa17.22■□□□□ 0.35
ATRX-217ENST00000624668 GIT1Q9Y2X7 761 aa17.22■□□□□ 0.35
ATRX-217ENST00000624668 C2orf16Q68DN1 1984 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 TEX28O15482 410 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 URODP06132 367 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 RPA1P27694 616 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 NCBP1Q09161 790 aaKnown RBP17.21■□□□□ 0.35
ATRX-217ENST00000624668 MAPK8IP2Q13387 824 aaPredicted RBP17.21■□□□□ 0.35
ATRX-217ENST00000624668 PADI6Q6TGC4 694 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 GPR149Q86SP6 731 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 ZBTB33Q86T24 672 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 MCPH1Q8NEM0 835 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 NACC1Q96RE7 527 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 PHOX2BQ99453 314 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 PAAF1Q9BRP4 392 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 GPR62Q9BZJ7 368 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 TRIM6Q9C030 488 aaPredicted RBP17.21■□□□□ 0.35
ATRX-217ENST00000624668 FZD8Q9H461 694 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 POLD4Q9HCU8 107 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 STK39Q9UEW8 545 aa17.21■□□□□ 0.35
ATRX-217ENST00000624668 MYO10Q9HD67 2058 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 DMDP11532 3685 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 MYBP10242 640 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 TCF15Q12870 199 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 TTC38Q5R3I4 469 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 NOSTRINQ8IVI9 506 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 SUGP1Q8IWZ8 645 aaKnown RBP17.2■□□□□ 0.34
ATRX-217ENST00000624668 ZDHHC14Q8IZN3 488 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 TDRD5Q8NAT2 981 aaKnown RBP17.2■□□□□ 0.34
ATRX-217ENST00000624668 CCDC113Q9H0I3 377 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 PDZD7Q9H5P4 517 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 RXFP1Q9HBX9 757 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 CHST7Q9NS84 486 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 LIMD1Q9UGP4 676 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 SORCS3Q9UPU3 1222 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 VPS13AQ96RL7 3174 aa17.2■□□□□ 0.34
ATRX-217ENST00000624668 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
ATRX-217ENST00000624668 CYP11B2P19099 503 aa17.19■□□□□ 0.34
ATRX-217ENST00000624668 GLUD2P49448 558 aa17.19■□□□□ 0.34
ATRX-217ENST00000624668 MRE11P49959 708 aa17.19■□□□□ 0.34
ATRX-217ENST00000624668 TOB1P50616 345 aaPredicted RBP17.19■□□□□ 0.34
ATRX-217ENST00000624668 DSG1Q02413 1049 aa17.19■□□□□ 0.34
ATRX-217ENST00000624668 ORC2Q13416 577 aaPredicted RBP17.19■□□□□ 0.34
ATRX-217ENST00000624668 MTMR3Q13615 1198 aa17.19■□□□□ 0.34
ATRX-217ENST00000624668 FAM187BQ17R55 369 aa17.19■□□□□ 0.34
ATRX-217ENST00000624668 C8orf34Q49A92 452 aa17.19■□□□□ 0.34
ATRX-217ENST00000624668 EEF1DP3Q658K8 133 aa17.19■□□□□ 0.34
ATRX-217ENST00000624668 PRIMPOLQ96LW4 560 aa17.19■□□□□ 0.34
ATRX-217ENST00000624668 KIFC3Q9BVG8 833 aa17.19■□□□□ 0.34
ATRX-217ENST00000624668 MAN1C1Q9NR34 630 aa17.19■□□□□ 0.34
ATRX-217ENST00000624668 PRMT7Q9NVM4 692 aaPredicted RBP17.19■□□□□ 0.34
ATRX-217ENST00000624668 PARP2Q9UGN5 583 aa17.19■□□□□ 0.34
ATRX-217ENST00000624668 USTQ9Y2C2 406 aa17.19■□□□□ 0.34
ATRX-217ENST00000624668 ARHGEF35A5YM69 484 aa17.18■□□□□ 0.34
ATRX-217ENST00000624668 PTGESO14684 152 aa17.18■□□□□ 0.34
ATRX-217ENST00000624668 N4BP1O75113 896 aaKnown RBP17.18■□□□□ 0.34
ATRX-217ENST00000624668 SPATA31D3P0C874 917 aa17.18■□□□□ 0.34
ATRX-217ENST00000624668 RBM25P49756 843 aaKnown RBP17.18■□□□□ 0.34
ATRX-217ENST00000624668 GRIK3Q13003 919 aa17.18■□□□□ 0.34
ATRX-217ENST00000624668 NAB2Q15742 525 aa17.18■□□□□ 0.34
ATRX-217ENST00000624668 FUT10Q6P4F1 479 aa17.18■□□□□ 0.34
ATRX-217ENST00000624668 SPATA31D4Q6ZUB0 917 aa17.18■□□□□ 0.34
ATRX-217ENST00000624668 HACE1Q8IYU2 909 aa17.18■□□□□ 0.34
ATRX-217ENST00000624668 CACNA1HO95180 2353 aa17.18■□□□□ 0.34
ATRX-217ENST00000624668 ZMYM2Q9UBW7 1377 aa17.17■□□□□ 0.34
ATRX-217ENST00000624668 RFPL2O75678 378 aa17.17■□□□□ 0.34
ATRX-217ENST00000624668 ADH1AP07327 375 aa17.17■□□□□ 0.34
ATRX-217ENST00000624668 IGFBP6P24592 240 aaPredicted RBP17.17■□□□□ 0.34
ATRX-217ENST00000624668 U2AF2P26368 475 aaKnown RBP eCLIP17.17■□□□□ 0.34
ATRX-217ENST00000624668 AVPR2P30518 371 aa17.17■□□□□ 0.34
ATRX-217ENST00000624668 FXR2P51116 673 aaKnown RBP eCLIP17.17■□□□□ 0.34
ATRX-217ENST00000624668 HMGN5P82970 282 aaKnown RBP17.17■□□□□ 0.34
ATRX-217ENST00000624668 C15orf39Q6ZRI6 1047 aa17.17■□□□□ 0.34
ATRX-217ENST00000624668 CCDC149Q6ZUS6 474 aa17.17■□□□□ 0.34
ATRX-217ENST00000624668 UBALD2Q8IYN6 164 aa17.17■□□□□ 0.34
ATRX-217ENST00000624668 CMASQ8NFW8 434 aaPredicted RBP17.17■□□□□ 0.34
ATRX-217ENST00000624668 ERMNQ8TAM6 284 aa17.17■□□□□ 0.34
ATRX-217ENST00000624668 ZNF707Q96C28 371 aaPredicted RBP17.17■□□□□ 0.34
ATRX-217ENST00000624668 ZSCAN31Q96LW9 406 aaPredicted RBP17.17■□□□□ 0.34
ATRX-217ENST00000624668 COLEC11Q9BWP8 271 aa17.17■□□□□ 0.34
ATRX-217ENST00000624668 SNTG2Q9NY99 539 aa17.17■□□□□ 0.34
ATRX-217ENST00000624668 ADAM28Q9UKQ2 775 aa17.17■□□□□ 0.34
ATRX-217ENST00000624668 CASTOR2A6NHX0 329 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 SPDYE4A6NLX3 237 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 GLUD1P00367 558 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 PRKCBP05771 671 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 RPL17P18621 184 aaKnown RBP17.16■□□□□ 0.34
ATRX-217ENST00000624668 LIG1P18858 919 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 CCT6AP40227 531 aaKnown RBP17.16■□□□□ 0.34
ATRX-217ENST00000624668 NAMPTP43490 491 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms