RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 C9orf72Q96LT7 481 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 TMEM117Q9H0C3 514 aa17.18■□□□□ 0.34
GABRB3-215ENST00000622697 PFASO15067 1338 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 ARHGEF28Q8N1W1 1705 aaKnown RBP17.17■□□□□ 0.34
GABRB3-215ENST00000622697 HERVK_113P62684 666 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 PI4K2AQ9BTU6 479 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 ETNK1Q9HBU6 452 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 ASNSD1Q9NWL6 643 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 NYAP2Q9P242 653 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 PPP1R9AQ9ULJ8 1098 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 A0A087X0B3 334 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 COG7P83436 770 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 CAV1Q03135 178 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 THOC5Q13769 683 aaKnown RBP17.17■□□□□ 0.34
GABRB3-215ENST00000622697 EZH2Q15910 746 aaKnown RBP17.17■□□□□ 0.34
GABRB3-215ENST00000622697 SNRNP35Q16560 246 aaKnown RBP17.17■□□□□ 0.34
GABRB3-215ENST00000622697 TTI2Q6NXR4 508 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 RFX8Q6ZV50 586 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 USP38Q8NB14 1042 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 SKA2Q8WVK7 121 aaPredicted RBP17.17■□□□□ 0.34
GABRB3-215ENST00000622697 DNAJC7Q99615 494 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 AP5M1Q9H0R1 490 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 HAUS2Q9NVX0 235 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 LRRIQ3A6PVS8 624 aaPredicted RBP17.17■□□□□ 0.34
GABRB3-215ENST00000622697 SRGAP2BP0DMP2 458 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 TBXAS1P24557 533 aaPredicted RBP17.17■□□□□ 0.34
GABRB3-215ENST00000622697 BAATQ14032 418 aaPredicted RBP17.17■□□□□ 0.34
GABRB3-215ENST00000622697 MYLK4Q86YV6 388 aaPredicted RBP17.17■□□□□ 0.34
GABRB3-215ENST00000622697 CRLF3Q8IUI8 442 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 LRGUKQ96M69 825 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 LBHD1Q9BQE6 289 aaPredicted RBP17.17■□□□□ 0.34
GABRB3-215ENST00000622697 SUGT1Q9Y2Z0 365 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 CHUKO15111 745 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 TRPA1O75762 1119 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 RFX1P22670 979 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 ATG16L1Q676U5 607 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 TRAPPC11Q7Z392 1133 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 LRRC37BQ96QE4 947 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 CRAMP1Q96RY5 1269 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 PLAGL2Q9UPG8 496 aa17.17■□□□□ 0.34
GABRB3-215ENST00000622697 COMTP21964 271 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 FAM102AQ5T9C2 384 aaPredicted RBP17.16■□□□□ 0.34
GABRB3-215ENST00000622697 LRRC43Q8N309 656 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 GBP7Q8N8V2 638 aaPredicted RBP17.16■□□□□ 0.34
GABRB3-215ENST00000622697 RPA1P27694 616 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 IRAK1P51617 712 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 RUSC1Q9BVN2 902 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 Q9H521 79 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 SMYD3Q9H7B4 428 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 NOP53Q9NZM5 478 aaKnown RBP17.16■□□□□ 0.34
GABRB3-215ENST00000622697 CREB3O43889 395 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 MED24O75448 989 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 PDE1CQ14123 709 aaPredicted RBP17.16■□□□□ 0.34
GABRB3-215ENST00000622697 C3orf67Q6ZVT6 689 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 KIFC3Q9BVG8 833 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 ZBTB7AO95365 584 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 IREB2P48200 963 aaKnown RBP17.16■□□□□ 0.34
GABRB3-215ENST00000622697 ZNF772Q68DY9 489 aaPredicted RBP17.16■□□□□ 0.34
GABRB3-215ENST00000622697 FBXO41Q8TF61 875 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 SMIM22K7EJ46 135 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 MAP3K7O43318 606 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 STRIP1Q5VSL9 837 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 EXT2Q93063 718 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 SPDL1Q96EA4 605 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 AGBL1Q96MI9 1066 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 VPS11Q9H270 941 aa17.16■□□□□ 0.34
GABRB3-215ENST00000622697 JPH1Q9HDC5 661 aaPredicted RBP17.16■□□□□ 0.34
GABRB3-215ENST00000622697 CYP11B2P19099 503 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 TTC13Q8NBP0 860 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 ALG6Q9Y672 507 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 MEFVO15553 781 aaPredicted RBP17.15■□□□□ 0.34
GABRB3-215ENST00000622697 PHF2O75151 1096 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 NPEPPSP55786 919 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 CDKAL1Q5VV42 579 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 PRAMEF18Q5VWM3 479 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 PARVAQ9NVD7 372 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 KLHL8Q9P2G9 620 aaPredicted RBP17.15■□□□□ 0.34
GABRB3-215ENST00000622697 IPO11Q9UI26 975 aaKnown RBP17.15■□□□□ 0.34
GABRB3-215ENST00000622697 LSP1P33241 339 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 TFDP2Q14188 446 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 PARP9Q8IXQ6 854 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 RNF149Q8NC42 400 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 STRIP2Q9ULQ0 834 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 TAL1P17542 331 aaPredicted RBP17.15■□□□□ 0.34
GABRB3-215ENST00000622697 DSTYKQ6XUX3 929 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 METTL23Q86XA0 190 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 JAMLQ86YT9 394 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 MMGT1Q8N4V1 131 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 TRIM4Q9C037 500 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 ACAD9Q9H845 621 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 KBTBD4Q9NVX7 518 aa17.15■□□□□ 0.34
GABRB3-215ENST00000622697 CSPG5O95196 566 aa17.14■□□□□ 0.34
GABRB3-215ENST00000622697 CASP4P49662 377 aa17.14■□□□□ 0.34
GABRB3-215ENST00000622697 P3H1Q32P28 736 aa17.14■□□□□ 0.34
GABRB3-215ENST00000622697 TTC25Q96NG3 672 aa17.14■□□□□ 0.34
GABRB3-215ENST00000622697 FAM167BQ9BTA0 163 aa17.14■□□□□ 0.34
GABRB3-215ENST00000622697 MRPL4Q9BYD3 311 aaKnown RBP17.14■□□□□ 0.34
GABRB3-215ENST00000622697 WTIPA6NIX2 430 aaPredicted RBP17.14■□□□□ 0.33
GABRB3-215ENST00000622697 TBX3O15119 743 aa17.14■□□□□ 0.33
GABRB3-215ENST00000622697 LPXNO60711 386 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms