RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 RCN2Q14257 317 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 REXO1L1PQ8IX06 675 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 RGL1Q9NZL6 768 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 ITGB1BP2Q9UKP3 347 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 DDNO94850 711 aaPredicted RBP11.12□□□□□ -0.63
COL25A1-209ENST00000622134 PLEKHA8P1O95397 391 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 POLR2FP61218 127 aaKnown RBP11.12□□□□□ -0.63
COL25A1-209ENST00000622134 AP2B1P63010 937 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 PALM2Q8IXS6 379 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 SYT2Q8N9I0 419 aaPredicted RBP11.12□□□□□ -0.63
COL25A1-209ENST00000622134 B4GALNT2Q8NHY0 566 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 RIN2Q8WYP3 895 aaPredicted RBP11.12□□□□□ -0.63
COL25A1-209ENST00000622134 HTATIP2Q9BUP3 242 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 FAM205AQ6ZU69 1335 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 ANP32DO95626 131 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 CDR2Q01850 454 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 DNAJC24Q6P3W2 148 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 TRPM8Q7Z2W7 1104 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 TBC1D10CQ8IV04 446 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 ZNF513Q8N8E2 541 aaPredicted RBP11.12□□□□□ -0.63
COL25A1-209ENST00000622134 GPRASP2Q96D09 838 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 TNIP3Q96KP6 325 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 TRPV6Q9H1D0 765 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 KCND2Q9NZV8 630 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 PRR12Q9ULL5 1215 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 E7ENQ6 273 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 MEIS1O00470 390 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 PODXLO00592 558 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 MGEA5O60502 916 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 KCNA3P22001 575 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 CA4P22748 312 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 CYP27A1Q02318 531 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 NR1H3Q13133 447 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 USP17L6PQ6QN14 398 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 UNC13DQ70J99 1090 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 EFHBQ8N7U6 833 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 HEXIM2Q96MH2 286 aaKnown RBP11.11□□□□□ -0.63
COL25A1-209ENST00000622134 HAUS8Q9BT25 410 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 NDUFA13Q9P0J0 144 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 FAM8A1Q9UBU6 413 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 AFG3L2Q9Y4W6 797 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 RALAP11233 206 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 CPB1P15086 417 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 SNAP25P60880 206 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 DR1Q01658 176 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 PPATQ06203 517 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 SFSWAPQ12872 951 aaKnown RBP11.11□□□□□ -0.63
COL25A1-209ENST00000622134 PROM2Q8N271 834 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 NKX2-3Q8TAU0 364 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 RAB21Q9UL25 225 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 PACSIN2Q9UNF0 486 aaPredicted RBP11.11□□□□□ -0.63
COL25A1-209ENST00000622134 NVLO15381 856 aaKnown RBP11.11□□□□□ -0.63
COL25A1-209ENST00000622134 FTCDO95954 541 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 ACADSP16219 412 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 PLCG1P19174 1290 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 SNX17Q15036 470 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 KRT80Q6KB66 452 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 MB21D2Q8IYB1 491 aaPredicted RBP11.11□□□□□ -0.63
COL25A1-209ENST00000622134 ZNF579Q8NAF0 562 aaKnown RBP11.11□□□□□ -0.63
COL25A1-209ENST00000622134 MYCBPAPQ8TBZ2 947 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 RIT2Q99578 217 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 EIF2AQ9BY44 585 aaKnown RBP11.11□□□□□ -0.63
COL25A1-209ENST00000622134 LSM7Q9UK45 103 aaKnown RBP11.11□□□□□ -0.63
COL25A1-209ENST00000622134 STAP1Q9ULZ2 295 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 CPP00450 1065 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 ATP1A1P05023 1023 aaKnown RBP11.11□□□□□ -0.63
COL25A1-209ENST00000622134 SERPING1P05155 500 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 SPARCL1Q14515 664 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 CXorf38Q8TB03 319 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 SEPT8Q92599 483 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 POLR3FQ9H1D9 316 aaPredicted RBP11.11□□□□□ -0.63
COL25A1-209ENST00000622134 NDE1Q9NXR1 346 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 MEGF6O75095 1541 aa11.11□□□□□ -0.63
COL25A1-209ENST00000622134 hCG_2014768A0A024R1R8 64 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 POTEB3A0JP26 581 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 LRRIQ3A6PVS8 624 aaPredicted RBP11.1□□□□□ -0.63
COL25A1-209ENST00000622134 CYBBP04839 570 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 CYP2C9P11712 490 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 OSTNP61366 133 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 STILQ15468 1287 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 OR6B2Q6IFH4 312 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 POTEBQ6S5H4 581 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 RBM43Q6ZSC3 357 aaKnown RBP11.1□□□□□ -0.63
COL25A1-209ENST00000622134 ENOSF1Q7L5Y1 443 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 SH2D3CQ8N5H7 860 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 DLGAP2Q9P1A6 1054 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 EPS15L1Q9UBC2 864 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 NWD1Q149M9 1564 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 TMCC1O94876 653 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 IL1R1P14778 569 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 SLCO1A2P46721 670 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 MAP1SQ66K74 1059 aaPredicted RBP11.1□□□□□ -0.63
COL25A1-209ENST00000622134 C16orf87Q6PH81 154 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 SCN4BQ8IWT1 228 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 EPSTI1Q96J88 318 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 ACAP3Q96P50 834 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 ZNF446Q9NWS9 450 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 ZFP69BQ9UJL9 534 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 SNX12Q9UMY4 172 aa11.1□□□□□ -0.63
COL25A1-209ENST00000622134 USP15Q9Y4E8 981 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms