RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 SCYL3Q8IZE3 742 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 SH2D3CQ8N5H7 860 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 DDX1Q92499 740 aaKnown RBP10.16□□□□□ -0.78
PDPN-212ENST00000621990 ATP6V0A1Q93050 837 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 ZNF214Q9UL59 606 aaPredicted RBP10.16□□□□□ -0.78
PDPN-212ENST00000621990 BCS1LQ9Y276 419 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 GOLGA8IPA6NC78 632 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 GOLGA8JA6NMD2 632 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 DKC1O60832 514 aaKnown RBP eCLIP10.16□□□□□ -0.78
PDPN-212ENST00000621990 PPFIA2O75334 1257 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 GGPS1O95749 300 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 CYP11B1P15538 503 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 GARTP22102 1010 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 CTNNA2P26232 953 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 ABCD1P33897 745 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 DR1Q01658 176 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 CDR2Q01850 454 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 MAP2K1Q02750 393 aaPredicted RBP10.16□□□□□ -0.78
PDPN-212ENST00000621990 CYP24A1Q07973 514 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 ZNF844Q08AG5 666 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 BRDTQ58F21 947 aaPredicted RBP10.16□□□□□ -0.78
PDPN-212ENST00000621990 NSMFQ6X4W1 530 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 UBL4BQ8N7F7 174 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 KIFC3Q9BVG8 833 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 CELF4Q9BZC1 486 aaKnown RBP10.16□□□□□ -0.78
PDPN-212ENST00000621990 TSPYL1Q9H0U9 437 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 WNT8AQ9H1J5 351 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 ERVK-5Q9HDB9 667 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 KMT5AQ9NQR1 393 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 ZDHHC18Q9NUE0 388 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 CTTNBP2NLQ9P2B4 639 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 RGS17Q9UGC6 210 aaPredicted RBP10.16□□□□□ -0.78
PDPN-212ENST00000621990 CTDP1Q9Y5B0 961 aaPredicted RBP10.16□□□□□ -0.78
PDPN-212ENST00000621990 ADGRA3Q8IWK6 1321 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 DOCK5Q9H7D0 1870 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 CCDC169A6NNP5 214 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 NFKBIEO00221 500 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 CYP26A1O43174 497 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 GRIN3BO60391 1043 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 ZC3H11AO75152 810 aaKnown RBP eCLIP10.15□□□□□ -0.78
PDPN-212ENST00000621990 STAM2O75886 525 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 DGAT1O75907 488 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 PTPRAP18433 802 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 NR1D1P20393 614 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 FLT3P36888 993 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 BIRC3Q13489 604 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 CEP85LQ5SZL2 805 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 KCTD16Q68DU8 428 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 C15orf39Q6ZRI6 1047 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 USP37Q86T82 979 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 ZNF280CQ8ND82 737 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 FBXL13Q8NEE6 735 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 MCPH1Q8NEM0 835 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 NSUN6Q8TEA1 469 aaKnown RBP10.15□□□□□ -0.78
PDPN-212ENST00000621990 KRT35Q92764 455 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 SAAL1Q96ER3 474 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 ERP44Q9BS26 406 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 AS3MTQ9HBK9 375 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 ARHGAP28Q9P2N2 729 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 PCYOX1Q9UHG3 505 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 HACL1Q9UJ83 578 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 GTF3C4Q9UKN8 822 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 DSG3P32926 999 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 CTNNA1P35221 906 aaKnown RBP10.15□□□□□ -0.78
PDPN-212ENST00000621990 IRX5P78411 483 aaPredicted RBP10.15□□□□□ -0.78
PDPN-212ENST00000621990 GCNT1Q02742 428 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 CYP1B1Q16678 543 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 DALRD3Q5D0E6 543 aaKnown RBP10.15□□□□□ -0.78
PDPN-212ENST00000621990 DNAJC21Q5F1R6 531 aaKnown RBP10.15□□□□□ -0.78
PDPN-212ENST00000621990 NBPF12Q5TAG4 269 aaPredicted RBP10.15□□□□□ -0.78
PDPN-212ENST00000621990 DCAF15Q66K64 600 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 ENOSF1Q7L5Y1 443 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 PPM1KQ8N3J5 372 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 TAS1R2Q8TE23 839 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 CDHR1Q96JP9 859 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 XPNPEP1Q9NQW7 623 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 RAB20Q9NX57 234 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 UVRAGQ9P2Y5 699 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 GABBR1Q9UBS5 961 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 RSPH14Q9UHP6 348 aa10.15□□□□□ -0.78
PDPN-212ENST00000621990 MYO1FO00160 1098 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 PHF2O75151 1096 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 PSAPP07602 524 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 MMEP08473 750 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 MYZAPP0CAP1 466 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 COMTP21964 271 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 SCP2P22307 547 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 CHRNA3P32297 505 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 PTGIRP43119 386 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 SNRNP48Q6IEG0 339 aaKnown RBP10.14□□□□□ -0.79
PDPN-212ENST00000621990 ABHD15Q6UXT9 468 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 SV2AQ7L0J3 742 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 TAS1R3Q7RTX0 852 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 MICALL2Q8IY33 904 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 PROCA1Q8NCQ7 364 aaPredicted RBP10.14□□□□□ -0.79
PDPN-212ENST00000621990 CEP170P1Q96L14 293 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 FAM81BQ96LP2 452 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 NT5C1BQ96P26 610 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 JPH1Q9HDC5 661 aaPredicted RBP10.14□□□□□ -0.79
PDPN-212ENST00000621990 TMOD4Q9NZQ9 345 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms