RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ENOSF1Q7L5Y1 443 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 NLGN2Q8NFZ4 835 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 PRPF31Q8WWY3 499 aaKnown RBP9.85□□□□□ -0.83
GGA3-223ENST00000621870 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.85□□□□□ -0.835e-7■■■■□ 23.5
GGA3-223ENST00000621870 ATP6V1E2Q96A05 226 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 SDK1Q7Z5N4 2213 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 STRNO43815 780 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 MED24O75448 989 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 APOEP02649 317 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 IFNAR2P48551 515 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 FXR2P51116 673 aaKnown RBP eCLIP9.85□□□□□ -0.83
GGA3-223ENST00000621870 FMR1Q06787 632 aaKnown RBP eCLIP9.85□□□□□ -0.83
GGA3-223ENST00000621870 C2orf54Q08AI8 447 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 KYAT1Q16773 422 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 LY6KQ17RY6 165 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 DEFB115Q30KQ5 88 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 KCTD16Q68DU8 428 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 NXNQ6DKJ4 435 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 CC2D1AQ6P1N0 951 aaPredicted RBP9.85□□□□□ -0.83
GGA3-223ENST00000621870 CLEC17AQ6ZS10 378 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 PCGF5Q86SE9 256 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 PCSK9Q8NBP7 692 aaKnown RBP9.85□□□□□ -0.83
GGA3-223ENST00000621870 GMCL1P1Q8NEA9 526 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 ZNF564Q8TBZ8 553 aaPredicted RBP9.85□□□□□ -0.83
GGA3-223ENST00000621870 RUNDC3BQ96NL0 473 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 KCND2Q9NZV8 630 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 NWD1Q149M9 1564 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 EIF3CLB5ME19 914 aaKnown RBP9.85□□□□□ -0.83
GGA3-223ENST00000621870 F5H423 210 aaPredicted RBP9.85□□□□□ -0.83
GGA3-223ENST00000621870 KIAA0391O15091 583 aaKnown RBP9.85□□□□□ -0.83
GGA3-223ENST00000621870 HMBSP08397 361 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 THOC5Q13769 683 aaKnown RBP9.85□□□□□ -0.83
GGA3-223ENST00000621870 MGAT5BQ3V5L5 792 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 SLC30A5Q8TAD4 765 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 EIF3CQ99613 913 aaKnown RBP9.85□□□□□ -0.83
GGA3-223ENST00000621870 TTC1Q99614 292 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 PI4K2AQ9BTU6 479 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 NUP85Q9BW27 656 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 TTC7AQ9ULT0 858 aaPredicted RBP9.85□□□□□ -0.83
GGA3-223ENST00000621870 HPCAL4Q9UM19 191 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 HLA-DRAP01903 254 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 SUPT20HL2P0C7V6 817 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 SLCO1A2P46721 670 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 FMO5P49326 533 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 SLC7A5Q01650 507 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 ZNF449Q6P9G9 518 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 PBKQ96KB5 322 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 SEPT5Q99719 369 aaPredicted RBP9.84□□□□□ -0.83
GGA3-223ENST00000621870 PPP1R12CQ9BZL4 782 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 ABHD16BQ9H3Z7 469 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 TRPC7Q9HCX4 862 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 PXMP2Q9NR77 195 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 SETD4Q9NVD3 440 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 OGFRQ9NZT2 677 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 KIF13AQ9H1H9 1805 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 GOLGA8CPA6NN73 597 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 PQBP1O60828 265 aaKnown RBP9.84□□□□□ -0.83
GGA3-223ENST00000621870 ZNF286BP0CG31 522 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 RAG1P15918 1043 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 BCAR1P56945 870 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 DHX9Q08211 1270 aaKnown RBP9.84□□□□□ -0.83
GGA3-223ENST00000621870 DPYDQ12882 1025 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 DEFB128Q7Z7B8 93 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 MICALL1Q8N3F8 863 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 RDM1Q8NG50 284 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 C18orf8Q96DM3 657 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 OSMRQ99650 979 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 A1CFQ9NQ94 594 aaKnown RBP9.84□□□□□ -0.83
GGA3-223ENST00000621870 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.84□□□□□ -0.83
GGA3-223ENST00000621870 TBK1Q9UHD2 729 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 CLGNO14967 610 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 GRAP2O75791 330 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 TJP3O95049 919 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 SLC9A1P19634 815 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 GARSP41250 739 aaKnown RBP9.84□□□□□ -0.83
GGA3-223ENST00000621870 ALDH7A1P49419 539 aaKnown RBP9.84□□□□□ -0.83
GGA3-223ENST00000621870 MNAT1P51948 309 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 NOP14P78316 857 aaKnown RBP9.84□□□□□ -0.83
GGA3-223ENST00000621870 SGSM1Q2NKQ1 1148 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 SYT2Q8N9I0 419 aaPredicted RBP9.84□□□□□ -0.83
GGA3-223ENST00000621870 SH3TC2Q8TF17 1288 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 HDAC11Q96DB2 347 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 POLR3CQ9BUI4 534 aaPredicted RBP9.84□□□□□ -0.83
GGA3-223ENST00000621870 RUSC1Q9BVN2 902 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 ANGPTL3Q9Y5C1 460 aa9.84□□□□□ -0.83
GGA3-223ENST00000621870 COL3A1P02461 1466 aaPredicted RBP9.83□□□□□ -0.84
GGA3-223ENST00000621870 RNF40O75150 1001 aa9.83□□□□□ -0.84
GGA3-223ENST00000621870 INSRRP14616 1297 aa9.83□□□□□ -0.84
GGA3-223ENST00000621870 SOX5P35711 763 aa9.83□□□□□ -0.84
GGA3-223ENST00000621870 CDH6P55285 790 aa9.83□□□□□ -0.84
GGA3-223ENST00000621870 ERVK-9P63128 1117 aa9.83□□□□□ -0.84
GGA3-223ENST00000621870 ERVK-24P63145 666 aa9.83□□□□□ -0.84
GGA3-223ENST00000621870 CDK17Q00537 523 aa9.83□□□□□ -0.84
GGA3-223ENST00000621870 EFHC2Q5JST6 749 aa9.83□□□□□ -0.84
GGA3-223ENST00000621870 SARM1Q6SZW1 724 aa9.83□□□□□ -0.84
GGA3-223ENST00000621870 METTL7BQ6UX53 244 aa9.83□□□□□ -0.84
GGA3-223ENST00000621870 RBM41Q96IZ5 413 aaKnown RBP9.83□□□□□ -0.84
GGA3-223ENST00000621870 CLMNQ96JQ2 1002 aa9.83□□□□□ -0.84
GGA3-223ENST00000621870 NCAPGQ9BPX3 1015 aa9.83□□□□□ -0.84
GGA3-223ENST00000621870 FAM114A2Q9NRY5 505 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms