RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 EXOC7Q9UPT5 735 aa20.36■□□□□ 0.85
CIRBP-245ENST00000621399 LINC01553A4QN01 128 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 MEIS3P2A8K0S8 358 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 CLDN3O15551 220 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 PIGRP01833 764 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 MCF2P10911 925 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 PROZP22891 400 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 EHHADHQ08426 723 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 PNOCQ13519 176 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 CLLU1OSQ5K130 101 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 AGMOQ6ZNB7 445 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 GLIS3Q8NEA6 775 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 ZBTB45Q96K62 511 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-245ENST00000621399 CASD1Q96PB1 797 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 CDT1Q9H211 546 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 RSAD1Q9HA92 442 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 SLC39A2Q9NP94 309 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 PARP2Q9UGN5 583 aa20.35■□□□□ 0.85
CIRBP-245ENST00000621399 MYH11P35749 1972 aa20.34■□□□□ 0.85
CIRBP-245ENST00000621399 PTPRSQ13332 1948 aa20.34■□□□□ 0.85
CIRBP-245ENST00000621399 OFD1O75665 1012 aa20.34■□□□□ 0.85
CIRBP-245ENST00000621399 PRPF6O94906 941 aaKnown RBP20.34■□□□□ 0.85
CIRBP-245ENST00000621399 HARSP12081 509 aaKnown RBP20.34■□□□□ 0.85
CIRBP-245ENST00000621399 AKAP5P24588 427 aa20.34■□□□□ 0.85
CIRBP-245ENST00000621399 TAP1Q03518 808 aa20.34■□□□□ 0.85
CIRBP-245ENST00000621399 KCNA1Q09470 495 aa20.34■□□□□ 0.85
CIRBP-245ENST00000621399 PSMD2Q13200 908 aa20.34■□□□□ 0.85
CIRBP-245ENST00000621399 SYCP3Q8IZU3 236 aa20.34■□□□□ 0.85
CIRBP-245ENST00000621399 TMEM206Q9H813 350 aa20.34■□□□□ 0.85
CIRBP-245ENST00000621399 LMBRD1Q9NUN5 540 aa20.34■□□□□ 0.85
CIRBP-245ENST00000621399 INPP5FQ9Y2H2 1132 aa20.34■□□□□ 0.85
CIRBP-245ENST00000621399 TMEM265A0A087WTH1 108 aa20.33■□□□□ 0.85
CIRBP-245ENST00000621399 ABLIM1O14639 778 aa20.33■□□□□ 0.85
CIRBP-245ENST00000621399 ARHGEF15O94989 841 aa20.33■□□□□ 0.85
CIRBP-245ENST00000621399 NOLC1Q14978 699 aaKnown RBP eCLIP20.33■□□□□ 0.85
CIRBP-245ENST00000621399 ZNF697Q5TEC3 545 aa20.33■□□□□ 0.85
CIRBP-245ENST00000621399 GPR153Q6NV75 609 aa20.33■□□□□ 0.85
CIRBP-245ENST00000621399 ELOA2Q8IYF1 753 aaPredicted RBP20.33■□□□□ 0.85
CIRBP-245ENST00000621399 ZNF576Q9H609 170 aa20.33■□□□□ 0.85
CIRBP-245ENST00000621399 SNTG2Q9NY99 539 aa20.33■□□□□ 0.85
CIRBP-245ENST00000621399 GIT1Q9Y2X7 761 aa20.33■□□□□ 0.85
CIRBP-245ENST00000621399 ANKRD63C9JTQ0 380 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 EIF3DO15371 548 aaKnown RBP eCLIP20.32■□□□□ 0.84
CIRBP-245ENST00000621399 SMC2O95347 1197 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 OSTNP61366 133 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 MCL1Q07820 350 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 STK4Q13043 487 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 NOMO2Q5JPE7 1267 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 SLFN12LQ6IEE8 588 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 EPM2AIP1Q7L775 607 aaPredicted RBP20.32■□□□□ 0.84
CIRBP-245ENST00000621399 THNSL1Q8IYQ7 743 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 ZNF507Q8TCN5 953 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 URGCPQ8TCY9 931 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 RSPH1Q8WYR4 309 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 CCDC94Q9BW85 323 aaPredicted RBP20.32■□□□□ 0.84
CIRBP-245ENST00000621399 MRPL9Q9BYD2 267 aaKnown RBP20.32■□□□□ 0.84
CIRBP-245ENST00000621399 IKZF4Q9H2S9 585 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 TYW1Q9NV66 732 aaKnown RBP20.32■□□□□ 0.84
CIRBP-245ENST00000621399 KLK14Q9P0G3 267 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 GDAQ9Y2T3 454 aa20.32■□□□□ 0.84
CIRBP-245ENST00000621399 MRPL42Q9Y6G3 142 aaKnown RBP20.32■□□□□ 0.84
CIRBP-245ENST00000621399 ARL5CA6NH57 179 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 RHOBTB3O94955 611 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 MLH1P40692 756 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 GRM5P41594 1212 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 KCNB1Q14721 858 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 SPOUT1Q5T280 376 aaKnown RBP20.31■□□□□ 0.84
CIRBP-245ENST00000621399 SLC39A4Q6P5W5 647 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 LRRC43Q8N309 656 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 CEP120Q8N960 986 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 SCFD1Q8WVM8 642 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 ERCC4Q92889 916 aaPredicted RBP20.31■□□□□ 0.84
CIRBP-245ENST00000621399 SMARCE1Q969G3 411 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 TGS1Q96RS0 853 aaKnown RBP20.31■□□□□ 0.84
CIRBP-245ENST00000621399 GAD1Q99259 594 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 HAPLN2Q9GZV7 340 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 TTYH1Q9H313 450 aaPredicted RBP20.31■□□□□ 0.84
CIRBP-245ENST00000621399 CERS4Q9HA82 394 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 RMND1Q9NWS8 449 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 MTUS1Q9ULD2 1270 aa20.31■□□□□ 0.84
CIRBP-245ENST00000621399 A0A0B4J269 797 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 TISP43B9A030 160 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 RECQL4O94761 1208 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 AFF1P51825 1210 aaKnown RBP20.3■□□□□ 0.84
CIRBP-245ENST00000621399 YARSP54577 528 aaKnown RBP20.3■□□□□ 0.84
CIRBP-245ENST00000621399 RNASELQ05823 741 aaKnown RBP20.3■□□□□ 0.84
CIRBP-245ENST00000621399 LRRC55Q6ZSA7 311 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 SPRED2Q7Z698 418 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 NELFCDQ8IXH7 590 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 KIAA0895Q8NCT3 520 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 ZFP42Q96MM3 310 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 FAM161BQ96MY7 647 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 GSDMAQ96QA5 445 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 C17orf80Q9BSJ5 609 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 MSTO1Q9BUK6 570 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 SEMA6BQ9H3T3 888 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 KANSL3Q9P2N6 904 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 PCDHA5Q9Y5H7 936 aa20.3■□□□□ 0.84
CIRBP-245ENST00000621399 UBE4BO95155 1302 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 CHD9Q3L8U1 2897 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms