RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 NDFIP2Q9NV92 336 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 ORC6Q9Y5N6 252 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 C3P01024 1663 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 SERPINB6P35237 376 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 HDLBPQ00341 1268 aaKnown RBP10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 OCRLQ01968 901 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 ZKSCAN4Q969J2 545 aaPredicted RBP10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 TRIM45Q9H8W5 580 aaPredicted RBP10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 SAMSN1Q9NSI8 373 aaKnown RBP10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 RNF14Q9UBS8 474 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 ENC1O14682 589 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 EYA4O95677 639 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 KRT7P08729 469 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 SFSWAPQ12872 951 aaKnown RBP10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 TAF11Q15544 211 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 CYP4A22Q5TCH4 519 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 PLEKHA5Q9HAU0 1116 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 SUN2Q9UH99 717 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 ADAM21Q9UKJ8 722 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 PRG3Q9Y2Y8 225 aaPredicted RBP10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 SRGAP2O75044 1071 aa10.4□□□□□ -0.75
CLTCL1-211ENST00000621271 CAPN15O75808 1086 aa10.4□□□□□ -0.75
CLTCL1-211ENST00000621271 NTSR2O95665 410 aa10.4□□□□□ -0.75
CLTCL1-211ENST00000621271 NR1H3Q13133 447 aa10.4□□□□□ -0.75
CLTCL1-211ENST00000621271 STILQ15468 1287 aa10.4□□□□□ -0.75
CLTCL1-211ENST00000621271 FBXL13Q8NEE6 735 aa10.4□□□□□ -0.75
CLTCL1-211ENST00000621271 PANX2Q96RD6 677 aa10.4□□□□□ -0.75
CLTCL1-211ENST00000621271 KIF2CQ99661 725 aa10.4□□□□□ -0.75
CLTCL1-211ENST00000621271 AFF4Q9UHB7 1163 aaKnown RBP10.4□□□□□ -0.75
CLTCL1-211ENST00000621271 EXOC1LA0A1B0GW35 172 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 MANSC4A6NHS7 340 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 DFFAO00273 331 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 C2CD2LO14523 706 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 HMBSP08397 361 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 XRRA1Q6P2D8 792 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 LZICQ8WZA0 190 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 DACT3Q96B18 629 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 SLITRK1Q96PX8 696 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 EPS15L1Q9UBC2 864 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 LRRC7Q96NW7 1537 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 IQANK1A0A1B0GTG1 560 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 RAG1P15918 1043 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 MAGEA9P43362 315 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 GPC5P78333 572 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 IMPG1Q17R60 797 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 MAP1SQ66K74 1059 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 KCTD16Q68DU8 428 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 TRIM72Q6ZMU5 477 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 SEPT8Q92599 483 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 DPP7Q9UHL4 492 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 CLCA2Q9UQC9 943 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 CD163L1Q9NR16 1453 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 BCAR1P56945 870 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 AP1B1Q10567 949 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 WASHC5Q12768 1159 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 KCNB1Q14721 858 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 EMC2Q15006 297 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 NOTUMQ6P988 496 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 STAG2Q8N3U4 1231 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 GBP7Q8N8V2 638 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 OR6P1Q8NGX9 317 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 TTC8Q8TAM2 541 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 MROH8Q9H579 483 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 ABCB6Q9NP58 842 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 CPA4Q9UI42 421 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 ATP8A1Q9Y2Q0 1164 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 PCDHA13Q9Y5I0 950 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 PPP2R3BQ9Y5P8 575 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 LAMC1P11047 1609 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 KRT37O76014 449 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 IRF1P10914 325 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 KCNH2Q12809 1159 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 SV2CQ496J9 727 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 EFCAB12Q6NXP0 572 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 MB21D2Q8IYB1 491 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 SPDL1Q96EA4 605 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 YIPF2Q9BWQ6 316 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 PRMT7Q9NVM4 692 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 STK38LQ9Y2H1 464 aa10.39□□□□□ -0.75
CLTCL1-211ENST00000621271 SOWAHDA6NJG2 315 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 GPR182O15218 404 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 IFT88Q13099 833 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 RCN2Q14257 317 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 SBK1Q52WX2 424 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 CCDC157Q569K6 752 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 MIPOL1Q8TD10 442 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 TACO1Q9BSH4 297 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 MUC3BQ9H195 1237 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 IP6K2Q9UHH9 426 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 RFX7Q2KHR2 1363 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 FAM95CA0A1B0GW59 222 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 UBA6A0AVT1 1052 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 MIF4GDA9UHW6 222 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 KIF3CO14782 793 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 ZNF189O75820 626 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 BAG2O95816 211 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 YY1P25490 414 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 ARHGEF7Q14155 803 aa10.38□□□□□ -0.75
CLTCL1-211ENST00000621271 ZNF579Q8NAF0 562 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms