RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 NAGPAQ9UK23 515 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 IGKV6D-21A0A0A0MT36 114 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 PHACTR2O75167 634 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 ARL2P36404 184 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 ZNF157P51786 506 aaPredicted RBP10.74□□□□□ -0.69
VTA1-205ENST00000620996 RTP1P59025 263 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 SLC20A2Q08357 652 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 ZBTB41Q5SVQ8 909 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 C1orf220Q5T0J3 134 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 GPR142Q7Z601 462 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 SHCBP1Q8NEM2 672 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 ATP8B4Q8TF62 1192 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 PPP1R13LQ8WUF5 828 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 AFG1LQ8WV93 481 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 SEMA4DQ92854 862 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 SMARCAD1Q9H4L7 1026 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 PDE11AQ9HCR9 933 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.74□□□□□ -0.69
VTA1-205ENST00000620996 RBAKQ9NYW8 714 aaPredicted RBP10.74□□□□□ -0.69
VTA1-205ENST00000620996 SUCLA2Q9P2R7 463 aaPredicted RBP10.74□□□□□ -0.69
VTA1-205ENST00000620996 JRKLQ9Y4A0 524 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 PAPPA2Q9BXP8 1791 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 CSDE1O75534 798 aaKnown RBP10.73□□□□□ -0.69
VTA1-205ENST00000620996 H2AFZP0C0S5 128 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 GCLCP48506 637 aaPredicted RBP10.73□□□□□ -0.69
VTA1-205ENST00000620996 GABPB1Q06547 395 aaPredicted RBP10.73□□□□□ -0.69
VTA1-205ENST00000620996 H2AFVQ71UI9 128 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 TRAPPC11Q7Z392 1133 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 SLC20A1Q8WUM9 679 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 NT5C1BQ96P26 610 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 MMS19Q96T76 1030 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 ACP6Q9NPH0 428 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 SMARCAL1Q9NZC9 954 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 DDX3XO00571 662 aaKnown RBP eCLIP10.73□□□□□ -0.695e-15■■■■□ 20.3
VTA1-205ENST00000620996 EXTL3O43909 919 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 MAFO75444 373 aaPredicted RBP10.73□□□□□ -0.69
VTA1-205ENST00000620996 GARTP22102 1010 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 PIK3CAP42336 1068 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 LAMTOR4Q0VGL1 99 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 TUBB2AQ13885 445 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 EFCAB12Q6NXP0 572 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 ANKRD23Q86SG2 305 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 FBXL13Q8NEE6 735 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 HINFPQ9BQA5 517 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 TUBB2BQ9BVA1 445 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 TMEM8AQ9HCN3 771 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 GINS2Q9Y248 185 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 A0A0G2JMZ2 1700 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 MCM3APO60318 1980 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.73□□□□□ -0.69
VTA1-205ENST00000620996 CLDN3O15551 220 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 AMPD2Q01433 879 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 NAB2Q15742 525 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 EPC2Q52LR7 807 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 ZNF662Q6ZS27 426 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 FAM43BQ6ZT52 329 aaPredicted RBP10.73□□□□□ -0.69
VTA1-205ENST00000620996 SV2AQ7L0J3 742 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 AFAP1L1Q8TED9 768 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 TCP11Q8WWU5 503 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 DHX38Q92620 1227 aaKnown RBP10.73□□□□□ -0.69
VTA1-205ENST00000620996 PTPN18Q99952 460 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 RNPEPQ9H4A4 650 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 RAB20Q9NX57 234 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 EHD2Q9NZN4 543 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 FBXL5Q9UKA1 691 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 AKT3Q9Y243 479 aa10.73□□□□□ -0.69
VTA1-205ENST00000620996 RBAK-RBAKDNI3L0D1 243 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 TRIM66O15016 1216 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 CYP26A1O43174 497 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 ADCY3O60266 1144 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 GH1P01241 217 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 PRKCBP05771 671 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 MFAP3P55082 362 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 CKAP4Q07065 602 aaKnown RBP10.72□□□□□ -0.69
VTA1-205ENST00000620996 C2orf54Q08AI8 447 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 IER5Q5VY09 327 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 CCDC62Q6P9F0 684 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 TMCO3Q6UWJ1 677 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 PLEKHH3Q7Z736 793 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 NOA1Q8NC60 698 aaKnown RBP10.72□□□□□ -0.69
VTA1-205ENST00000620996 LNX1Q8TBB1 728 aaPredicted RBP10.72□□□□□ -0.69
VTA1-205ENST00000620996 COG1Q8WTW3 980 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 C1orf112Q9NSG2 853 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 ERAP1Q9NZ08 941 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 SCN4AP35499 1836 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 TTLL13PA6NNM8 815 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 PJA2O43164 708 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 SEC31AO94979 1220 aaKnown RBP10.72□□□□□ -0.69
VTA1-205ENST00000620996 CALCAP01258 141 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 EDN1P05305 212 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 PRKCIP41743 596 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 CLCN6P51797 869 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 FKBP1BP68106 108 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 BMS1Q14692 1282 aaKnown RBP10.72□□□□□ -0.69
VTA1-205ENST00000620996 TARBP2Q15633 366 aaKnown RBP10.72□□□□□ -0.69
VTA1-205ENST00000620996 MAPK6Q16659 721 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 ZNF792Q3KQV3 632 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 WDR44Q5JSH3 913 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 SLFN12LQ6IEE8 588 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 THNSL1Q8IYQ7 743 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms