RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 H0YCG3 227 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 CDH16O75309 829 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 INHBAP08476 426 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 IFI35P80217 286 aaPredicted RBP13.13□□□□□ -0.31
SPCS1-206ENST00000619898 MTMR1Q13613 665 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 PODNQ7Z5L7 613 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 IGF2BP3O00425 579 aaKnown RBP eCLIP13.13□□□□□ -0.31
SPCS1-206ENST00000619898 DCTN3O75935 186 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 NPR1P16066 1061 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 CD58P19256 250 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 ITIH2P19823 946 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 SSTR3P32745 418 aaPredicted RBP13.13□□□□□ -0.31
SPCS1-206ENST00000619898 MOXD1Q6UVY6 613 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 IRF2BP2Q7Z5L9 587 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 FAM160B2Q86V87 743 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 SP8Q8IXZ3 490 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 EIF1ADQ8N9N8 165 aaKnown RBP13.13□□□□□ -0.31
SPCS1-206ENST00000619898 ATL2Q8NHH9 583 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 CFAP61Q8NHU2 1237 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 PYROXD1Q8WU10 500 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 SCFD2Q8WU76 684 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 DDX23Q9BUQ8 820 aaKnown RBP13.13□□□□□ -0.31
SPCS1-206ENST00000619898 KCNG1Q9UIX4 513 aa13.13□□□□□ -0.31
SPCS1-206ENST00000619898 KCPQ6ZWJ8 1503 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 GTPBP10A4D1E9 387 aaKnown RBP13.12□□□□□ -0.31
SPCS1-206ENST00000619898 SLC12A3P55017 1021 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 BASP1P80723 227 aaKnown RBP13.12□□□□□ -0.31
SPCS1-206ENST00000619898 EPC2Q52LR7 807 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.12□□□□□ -0.31
SPCS1-206ENST00000619898 YTHDF3Q7Z739 585 aaKnown RBP13.12□□□□□ -0.31
SPCS1-206ENST00000619898 ARHGEF26Q96DR7 871 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 ROPN1BQ9BZX4 212 aaPredicted RBP13.12□□□□□ -0.31
SPCS1-206ENST00000619898 ROPN1Q9HAT0 212 aaPredicted RBP13.12□□□□□ -0.31
SPCS1-206ENST00000619898 DCTN4Q9UJW0 460 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 SUFUQ9UMX1 484 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 A0A0G2JND7 137 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 RBAK-RBAKDNI3L0D1 243 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 BAG2O95816 211 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 PRKCIP41743 596 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 DPY19L2Q6NUT2 758 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 TMEM270Q6UE05 265 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 FUKQ8N0W3 1084 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 CCDC110Q8TBZ0 833 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 TRAIPQ9BWF2 469 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.12□□□□□ -0.31
SPCS1-206ENST00000619898 NOP56O00567 594 aaKnown RBP13.12□□□□□ -0.31
SPCS1-206ENST00000619898 NKRFO15226 690 aaKnown RBP eCLIP13.12□□□□□ -0.31
SPCS1-206ENST00000619898 CPP00450 1065 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 MT-ND3P03897 115 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 RARGP13631 454 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 HSPA1LP34931 641 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 ITGA8P53708 1063 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 MTERF2Q49AM1 385 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 LMBRD2Q68DH5 695 aaPredicted RBP13.12□□□□□ -0.31
SPCS1-206ENST00000619898 PDCD7Q8N8D1 485 aaKnown RBP13.12□□□□□ -0.31
SPCS1-206ENST00000619898 ATG4AQ8WYN0 398 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 CSADQ9Y600 493 aa13.12□□□□□ -0.31
SPCS1-206ENST00000619898 SGPL1O95470 568 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 POLR2BP30876 1174 aaKnown RBP13.11□□□□□ -0.31
SPCS1-206ENST00000619898 FLT3P36888 993 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 SREBF1P36956 1147 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 GPS1Q13098 491 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 RCN2Q14257 317 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 ZNF394Q53GI3 561 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 CFAP157Q5JU67 520 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 CASC4Q6P4E1 433 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 RHOT1Q8IXI2 618 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 KAT2BQ92831 832 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 KCTD10Q9H3F6 313 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 KDM4CQ9H3R0 1056 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 TPX2Q9ULW0 747 aaKnown RBP13.11□□□□□ -0.31
SPCS1-206ENST00000619898 MYH10P35580 1976 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 SCN11AQ9UI33 1791 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 TLR3O15455 904 aaKnown RBP13.11□□□□□ -0.31
SPCS1-206ENST00000619898 RNF8O76064 485 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 PHLDB3Q6NSJ2 640 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 ATP8B4Q8TF62 1192 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 CPA5Q8WXQ8 436 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 SPDL1Q96EA4 605 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 RBM15Q96T37 977 aaKnown RBP eCLIP13.11□□□□□ -0.31
SPCS1-206ENST00000619898 PAGR1Q9BTK6 254 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 DDX4Q9NQI0 724 aaKnown RBP13.11□□□□□ -0.31
SPCS1-206ENST00000619898 SCINQ9Y6U3 715 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 FAM86B1E9PN63 330 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 PI4K2BG5E9Z4 385 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 TJP3O95049 919 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 FAM86B2P0C5J1 330 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 RHBDL3P58872 404 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 MKRN3Q13064 507 aaKnown RBP13.11□□□□□ -0.31
SPCS1-206ENST00000619898 STAT4Q14765 748 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 NSMCE1Q8WV22 266 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 OLFML3Q9NRN5 406 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 GINM1Q9NU53 330 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 KLHL11Q9NVR0 708 aa13.11□□□□□ -0.31
SPCS1-206ENST00000619898 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.11□□□□□ -0.31
SPCS1-206ENST00000619898 SMIM24O75264 130 aa13.1□□□□□ -0.31
SPCS1-206ENST00000619898 UBOX5O94941 541 aa13.1□□□□□ -0.31
SPCS1-206ENST00000619898 ADRA2BP18089 450 aa13.1□□□□□ -0.31
SPCS1-206ENST00000619898 SHMT1P34896 483 aa13.1□□□□□ -0.31
SPCS1-206ENST00000619898 RPL21P46778 160 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms