RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 TREML2Q5T2D2 321 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 MEI1Q5TIA1 1274 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 NCAPG2Q86XI2 1143 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 DDX42Q86XP3 938 aaKnown RBP eCLIP7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 SYTL5Q8TDW5 730 aaPredicted RBP7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 C12orf42Q96LP6 360 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 SLITRK6Q9H5Y7 841 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 A0A087X0T9 212 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 CALUO43852 315 aaPredicted RBP7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 LCA5LO95447 670 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 FAM228BP0C875 321 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 TMEM132BQ14DG7 1078 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 MOXD1Q6UVY6 613 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 TAOK1Q7L7X3 1001 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 INTS9Q9NV88 658 aaKnown RBP7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 AMACRQ9UHK6 382 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 GREB1LQ9C091 1923 aaPredicted RBP7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 POLR2AP24928 1970 aaKnown RBP7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 CYP3A7-CYP3A51PA0A087WV96 503 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 FRMD3A2A2Y4 597 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 RASSF10A6NK89 507 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 MEIS1O00470 390 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 PEX10O60683 326 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 MMEP08473 750 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 CYP3A7P24462 503 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 CLUL1Q15846 466 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 NEK9Q8TD19 979 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 CLEC4DQ8WXI8 215 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 BAP1Q92560 729 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 IFT74Q96LB3 600 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 MMTAG2Q9BU76 263 aaKnown RBP7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 DONSONQ9NYP3 566 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 DDX20Q9UHI6 824 aaKnown RBP7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 DAAM1Q9Y4D1 1078 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 POTEB3A0JP26 581 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 POTECB2RU33 542 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 CXCL11O14625 94 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 AFPP02771 609 aaKnown RBP7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 STAT1P42224 750 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 FOXK1P85037 733 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 GRB10Q13322 594 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 Q4G0T1 1027 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 POTEBQ6S5H4 581 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 ADAT2Q7Z6V5 191 aaKnown RBP7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 TPH2Q8IWU9 490 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 KIF12Q96FN5 646 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 ACAD9Q9H845 621 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 A1CFQ9NQ94 594 aaKnown RBP7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 COL20A1Q9P218 1284 aa7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 MRPL42Q9Y6G3 142 aaKnown RBP7.52□□□□□ -1.21
SRGAP3-213ENST00000618999 E9PMD0 336 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 TBX3O15119 743 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 ARP10275 920 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 CIITAP33076 1130 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 ERVK-9P63128 1117 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 LACTBP83111 547 aaPredicted RBP7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 CCDC25Q86WR0 208 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 C2orf69Q8N8R5 385 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 EIF1ADQ8N9N8 165 aaKnown RBP7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 C1orf131Q8NDD1 294 aaKnown RBP7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 KCNMB3Q9NPA1 279 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 SALL4Q9UJQ4 1053 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 DNM3Q9UQ16 869 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 PCDHGC5Q9Y5F6 944 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 TRAPPC3O43617 180 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 CELF2O95319 508 aaKnown RBP7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 FGGP02679 453 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 CYP3A4P08684 503 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 ABCB4P21439 1286 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 IFNAR2P48551 515 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 PLTPP55058 493 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 CACNB1Q02641 598 aaPredicted RBP7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 PABPC4Q13310 644 aaKnown RBP eCLIP7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 COBLL1Q53SF7 1204 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 PHLDB3Q6NSJ2 640 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 PNMA5Q96PV4 448 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 TEKT3Q9BXF9 490 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 PACSIN1Q9BY11 444 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 HOMER3Q9NSC5 361 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 PARP2Q9UGN5 583 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 RABGAP1Q9Y3P9 1069 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 POTEFA5A3E0 1075 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 IPO5O00410 1097 aaKnown RBP7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 TTI1O43156 1089 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 SCTRP47872 440 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 HSD17B4P51659 736 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 GSCP56915 257 aaPredicted RBP7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 DR1Q01658 176 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 SP4Q02446 784 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 ZNF844Q08AG5 666 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 CALCOCO2Q13137 446 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 PREPLQ4J6C6 727 aaPredicted RBP7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 FAM133BQ5BKY9 247 aaKnown RBP7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 ANKRD20A8PQ5CZ79 823 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 POTEGQ6S5H5 508 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 POTEEQ6S8J3 1075 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 FASTKD5Q7L8L6 764 aaKnown RBP7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 IL31RAQ8NI17 732 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 RAPGEF5Q92565 580 aa7.51□□□□□ -1.21
SRGAP3-213ENST00000618999 INPP4AQ96PE3 977 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms