RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 BCAMP50895 628 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 ARMCX4Q5H9R4 360 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 NLRP9Q7RTR0 991 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 VIPAS39Q9H9C1 493 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 MTO1Q9Y2Z2 717 aaKnown RBP12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 FAM47DPA6NHR8 397 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 KCTD1Q719H9 257 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 USP44Q9H0E7 712 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 CCDC87Q9NVE4 849 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 ARID5BQ14865 1188 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 PDCD6IPQ8WUM4 868 aaKnown RBP12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 ATXN7L3BQ96GX2 97 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 OSBPL5Q9H0X9 879 aaPredicted RBP12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 LRFN2Q9ULH4 789 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 NCK2O43639 380 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 TSC22D2O75157 780 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 TYK2P29597 1187 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 DMPKQ09013 629 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 MBD2Q9UBB5 411 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 PDZK1P1A8MUH7 402 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 PSMA4P25789 261 aaKnown RBP12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 CCDC149Q6ZUS6 474 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 PCYOX1LQ8NBM8 494 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 ZBTB10Q96DT7 871 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 TRIM54Q9BYV2 358 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 UNC45AQ9H3U1 944 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 MYH1P12882 1939 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 MYH2Q9UKX2 1941 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 MYH4Q9Y623 1939 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 PAPOLBQ9NRJ5 636 aaKnown RBP12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 CHMP2BQ9UQN3 213 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 TRIM49P0CI25 452 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 TRIM49CP0CI26 452 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 RECQLP46063 649 aaPredicted RBP12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 ARSEP51690 589 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 TFDP2Q14188 446 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 SSH3Q8TE77 659 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 MTERF3Q96E29 417 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 SP110Q9HB58 689 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 ALG13Q9NP73 1137 aaKnown RBP12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 AIPL1Q9NZN9 384 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 CITO14578 2027 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 STAT4Q14765 748 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 Q3C1V9 767 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 CDKL3Q8IVW4 592 aaPredicted RBP12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 KIRREL3Q8IZU9 778 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 IQCA1LA6NCM1 817 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 SH2B2O14492 632 aaPredicted RBP12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 KLHL2O95198 593 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 ALDH1B1P30837 517 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 DDI1Q8WTU0 396 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 CARD9Q9H257 536 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 RNPEPQ9H4A4 650 aa12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.14□□□□□ -0.47
PCDHA4-204ENST00000618834 MYL2P10916 166 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 CYP2C19P33261 490 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 CRYMQ14894 314 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 IZUMO3Q5VZ72 239 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 THTPAQ9BU02 230 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 C20orf96Q9NUD7 363 aaPredicted RBP12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 SRP72O76094 671 aaKnown RBP12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 CNGA2Q16280 664 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 VPS50Q96JG6 964 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 ZFATQ9P243 1243 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 TSR3Q9UJK0 312 aaKnown RBP12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 MYH13Q9UKX3 1938 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 VHLP40337 213 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 RHPN2Q8IUC4 686 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 LSP1P33241 339 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 STX3Q13277 289 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 C1orf228Q6PIY5 440 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 TSPAN17Q96FV3 270 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 PSMC3IPQ9P2W1 217 aaPredicted RBP12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 DNAJC12Q9UKB3 198 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 SPDYAQ5MJ70 313 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 FANCEQ9HB96 536 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 ZCCHC17Q9NP64 241 aaKnown RBP12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 TBXAS1P24557 533 aaPredicted RBP12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 TADA1Q96BN2 335 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 RANBP17Q9H2T7 1088 aaKnown RBP12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 ZMYM1Q5SVZ6 1142 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 STAG2Q8N3U4 1231 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 OSTNP61366 133 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 DHX40Q8IX18 779 aaKnown RBP12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 PPCSQ9HAB8 311 aa12.13□□□□□ -0.47
PCDHA4-204ENST00000618834 ZSCAN20P17040 1043 aaPredicted RBP12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 TMEM270Q6UE05 265 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 RTL3Q8N8U3 475 aaKnown RBP12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 NDFIP2Q9NV92 336 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 SLC9A2Q9UBY0 812 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 CCT8L1PA6NM43 557 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 PPIP5K2O43314 1243 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 OSBPP22059 807 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 ERFP50548 548 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 MAP3K15Q6ZN16 1313 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 EIF2S1P05198 315 aaKnown RBP12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 IL13P35225 146 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 TAS2R42Q7RTR8 314 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 CCDC60Q8IWA6 550 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms