RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 PDZD7Q9H5P4 517 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 TLR9Q9NR96 1032 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 PCDHGC5Q9Y5F6 944 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 KMT2EQ8IZD2 1858 aa17.62■□□□□ 0.41
BRCA1-228ENST00000618469 TDRD15B5MCY1 1934 aaKnown RBP17.62■□□□□ 0.41
BRCA1-228ENST00000618469 ZSCAN22P10073 491 aaPredicted RBP17.61■□□□□ 0.41
BRCA1-228ENST00000618469 TXLNAP40222 546 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 NASPP49321 788 aaPredicted RBP17.61■□□□□ 0.41
BRCA1-228ENST00000618469 AFF1P51825 1210 aaKnown RBP17.61■□□□□ 0.41
BRCA1-228ENST00000618469 BCAR1P56945 870 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 UBE3AQ05086 875 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 ADAM15Q13444 863 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 STK38Q15208 465 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 USP49Q70CQ1 688 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 RBM23Q86U06 439 aaKnown RBP17.61■□□□□ 0.41
BRCA1-228ENST00000618469 GPBP1Q86WP2 473 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 SLC39A11Q8N1S5 342 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 RAD54LQ92698 747 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 EPSTI1Q96J88 318 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 CCSER1Q9C0I3 900 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 RNF39Q9H2S5 420 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 UBN1Q9NPG3 1134 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 KMT5AQ9NQR1 393 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 BLOC1S4Q9NUP1 217 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 SPG21Q9NZD8 308 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 KCND2Q9NZV8 630 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 USP20Q9Y2K6 914 aa17.61■□□□□ 0.41
BRCA1-228ENST00000618469 SRPRBQ9Y5M8 271 aaKnown RBP17.61■□□□□ 0.41
BRCA1-228ENST00000618469 NPHP3-ACAD11A0A0J9YXS1 232 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 NT5C1B-RDH14C9J2C7 533 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 ACKR2O00590 384 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 NCK2O43639 380 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 B4GALT3O60512 393 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 F13A1P00488 732 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 POMCP01189 267 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 ALDH7A1P49419 539 aaKnown RBP17.6■□□□□ 0.41
BRCA1-228ENST00000618469 PTPN5P54829 565 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 PLCB3Q01970 1234 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 PKP1Q13835 747 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 MCM6Q14566 821 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 SLC39A14Q15043 492 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 FOXD4L6Q3SYB3 417 aaPredicted RBP17.6■□□□□ 0.41
BRCA1-228ENST00000618469 FOXD4L3Q6VB84 417 aaPredicted RBP17.6■□□□□ 0.41
BRCA1-228ENST00000618469 KRI1Q8N9T8 703 aaKnown RBP17.6■□□□□ 0.41
BRCA1-228ENST00000618469 MRPS27Q92552 414 aaKnown RBP17.6■□□□□ 0.41
BRCA1-228ENST00000618469 PPP2R3CQ969Q6 453 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 ZFP42Q96MM3 310 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 ZNF396Q96N95 335 aaPredicted RBP17.6■□□□□ 0.41
BRCA1-228ENST00000618469 GAD1Q99259 594 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 ADPGKQ9BRR6 497 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 NRDE2Q9H7Z3 1164 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 C17orf75Q9HAS0 396 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 ARHGAP28Q9P2N2 729 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 DNAJB4Q9UDY4 337 aa17.6■□□□□ 0.41
BRCA1-228ENST00000618469 ARL5CA6NH57 179 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 SFI1A8K8P3 1242 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 SLC16A4O15374 487 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 PDIA4P13667 645 aaKnown RBP17.59■□□□□ 0.41
BRCA1-228ENST00000618469 AKAP5P24588 427 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 SCNN1GP51170 649 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 VCPP55072 806 aaKnown RBP17.59■□□□□ 0.41
BRCA1-228ENST00000618469 RBM10P98175 930 aaKnown RBP17.59■□□□□ 0.41
BRCA1-228ENST00000618469 PLPP4Q5VZY2 271 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 EEF1DP3Q658K8 133 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 TMEM173Q86WV6 379 aaPredicted RBP17.59■□□□□ 0.41
BRCA1-228ENST00000618469 ZNF280BQ86YH2 543 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 SUGP1Q8IWZ8 645 aaKnown RBP17.59■□□□□ 0.41
BRCA1-228ENST00000618469 MICAL1Q8TDZ2 1067 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 LARP4BQ92615 738 aaKnown RBP17.59■□□□□ 0.41
BRCA1-228ENST00000618469 TMEM169Q96HH4 297 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 FAM193BQ96PV7 902 aaPredicted RBP17.59■□□□□ 0.41
BRCA1-228ENST00000618469 REEP2Q9BRK0 252 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 ENTPD7Q9NQZ7 604 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 CLEC1BQ9P126 229 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 CCDC39Q9UFE4 941 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 PARP2Q9UGN5 583 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 BARX2Q9UMQ3 279 aaPredicted RBP17.59■□□□□ 0.41
BRCA1-228ENST00000618469 LZTS1Q9Y250 596 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 MORC2Q9Y6X9 1032 aaPredicted RBP17.59■□□□□ 0.41
BRCA1-228ENST00000618469 CFAP54Q96N23 3096 aa17.59■□□□□ 0.41
BRCA1-228ENST00000618469 ZDBF2Q9HCK1 2354 aa17.58■□□□□ 0.41
BRCA1-228ENST00000618469 K7ERI5 159 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 GFRA3O60609 400 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 KRT18P05783 430 aaKnown RBP17.58■□□□□ 0.4
BRCA1-228ENST00000618469 PLS3P13797 630 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 NRIP1P48552 1158 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 SLC11A1P49279 550 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 ZXDAP98168 799 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 KRT17Q04695 432 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 ARSHQ5FYA8 562 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 ATF7IP2Q5U623 682 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 LINC00301Q8NCQ3 95 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 MSLNLQ96KJ4 702 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 RPGRIP1Q96KN7 1286 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 TCF25Q9BQ70 676 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 KANSL3Q9P2N6 904 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 TFIP11Q9UBB9 837 aaKnown RBP17.58■□□□□ 0.4
BRCA1-228ENST00000618469 PUF60Q9UHX1 559 aaKnown RBP17.58■□□□□ 0.4
BRCA1-228ENST00000618469 ODF2LQ9ULJ1 636 aa17.58■□□□□ 0.4
BRCA1-228ENST00000618469 GIT1Q9Y2X7 761 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms