RNA–Protein interactions for RNA: ENST00000618159.1

PSMB3-210, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-210ENST00000618159 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.25□□□□□ -0.773e-10■■□□□ 14.2
PSMB3-210ENST00000618159 MIOSQ9NXC5 875 aa10.25□□□□□ -0.77
PSMB3-210ENST00000618159 TCEAL9Q9UHQ7 104 aa10.25□□□□□ -0.77
PSMB3-210ENST00000618159 NDRG2Q9UN36 371 aaKnown RBP10.25□□□□□ -0.77
PSMB3-210ENST00000618159 MRPS17Q9Y2R5 130 aaKnown RBP10.25□□□□□ -0.77
PSMB3-210ENST00000618159 SAMM50Q9Y512 469 aa10.25□□□□□ -0.77
PSMB3-210ENST00000618159 AKAP13Q12802 2813 aa10.25□□□□□ -0.77
PSMB3-210ENST00000618159 DSPP15924 2871 aaKnown RBP10.24□□□□□ -0.77
PSMB3-210ENST00000618159 NBEAQ8NFP9 2946 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 ARID2Q68CP9 1835 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 KIF26AQ9ULI4 1882 aaPredicted RBP10.24□□□□□ -0.77
PSMB3-210ENST00000618159 TMEM150BA6NC51 233 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 SMCO2A6NFE2 343 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 CCDC69A6NI79 296 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 WDR64B1ANS9 1081 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 ADAMTS3O15072 1205 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 CCL16O15467 120 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 PRC1O43663 620 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 STBD1O95210 358 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 HNRNPA1P09651 372 aaKnown RBP eCLIP10.24□□□□□ -0.77
PSMB3-210ENST00000618159 CALM1P0DP23 149 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 CALM2P0DP24 149 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 CALM3P0DP25 149 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 NCLP19338 710 aaKnown RBP10.24□□□□□ -0.77
PSMB3-210ENST00000618159 HOXA11P31270 313 aaPredicted RBP10.24□□□□□ -0.77
PSMB3-210ENST00000618159 SETQ01105 290 aaPredicted RBP10.24□□□□□ -0.77
PSMB3-210ENST00000618159 SATB1Q01826 763 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 MTERF2Q49AM1 385 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 JAKMIP3Q5VZ66 844 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 B4GALNT3Q6L9W6 998 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 FUT10Q6P4F1 479 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 POTEHQ6S545 545 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 CASC1Q6TDU7 716 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 UNQ6494/PRO21346Q6UXR6 183 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 NFXL1Q6ZNB6 911 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.24□□□□□ -0.77
PSMB3-210ENST00000618159 RHPN2Q8IUC4 686 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 NPAS3Q8IXF0 933 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 GPR65Q8IYL9 337 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 KDF1Q8NAX2 398 aaPredicted RBP10.24□□□□□ -0.77
PSMB3-210ENST00000618159 FANCBQ8NB91 859 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 SMG8Q8ND04 991 aaKnown RBP10.24□□□□□ -0.77
PSMB3-210ENST00000618159 SH2D3AQ9BRG2 576 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 MTA3Q9BTC8 594 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 DISC1Q9NRI5 854 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 RXFP3Q9NSD7 469 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 SUCLA2Q9P2R7 463 aaPredicted RBP10.24□□□□□ -0.77
PSMB3-210ENST00000618159 NUP205Q92621 2012 aa10.24□□□□□ -0.77
PSMB3-210ENST00000618159 ARL5CA6NH57 179 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 CHURC1-FNTBB4DL54 471 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 FOXD2O60548 495 aaPredicted RBP10.23□□□□□ -0.77
PSMB3-210ENST00000618159 ECI2O75521 394 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 HOXA9P31269 272 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 FNTBP49356 437 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 CCR3P51677 355 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 GAS6Q14393 721 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 PPP2R5DQ14738 602 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 SF3A2Q15428 464 aaKnown RBP10.23□□□□□ -0.77
PSMB3-210ENST00000618159 USP41Q3LFD5 358 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 AASDHQ4L235 1098 aaPredicted RBP10.23□□□□□ -0.77
PSMB3-210ENST00000618159 PRR16Q569H4 304 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 PPM1LQ5SGD2 360 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 PRSS55Q6UWB4 352 aaPredicted RBP10.23□□□□□ -0.77
PSMB3-210ENST00000618159 CHD1LQ86WJ1 897 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 SMC5Q8IY18 1101 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 TMTC2Q8N394 836 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 FAM160A2Q8N612 972 aaPredicted RBP10.23□□□□□ -0.77
PSMB3-210ENST00000618159 ING5Q8WYH8 240 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 LENG9Q96B70 501 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 NLRP4Q96MN2 994 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 GAD1Q99259 594 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 IER2Q9BTL4 223 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 TMEM121BQ9BXQ6 578 aaPredicted RBP10.23□□□□□ -0.77
PSMB3-210ENST00000618159 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
PSMB3-210ENST00000618159 MINDY3Q9H8M7 445 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 HCFC1R1Q9NWW0 138 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 SEPT9Q9UHD8 586 aaPredicted RBP10.23□□□□□ -0.77
PSMB3-210ENST00000618159 LOC400499M0QZD8 3231 aa10.23□□□□□ -0.77
PSMB3-210ENST00000618159 SOBPA7XYQ1 873 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 KCNK5O95279 499 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 C8AP07357 584 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 ITGA4P13612 1032 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 MLH1P40692 756 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 LIFRP42702 1097 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 DNM2P50570 870 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 SCNN1GP51170 649 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 FUT2Q10981 343 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 RTP2Q5QGT7 225 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 TANGO2Q6ICL3 276 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 MICU3Q86XE3 530 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 DNASE1L2Q92874 299 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 TMEM87BQ96K49 555 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 ZFP42Q96MM3 310 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 CLSTN3Q9BQT9 956 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 COLEC11Q9BWP8 271 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 LMAN1LQ9HAT1 526 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 BARHL2Q9NY43 387 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 DNMT3BQ9UBC3 853 aaKnown RBP10.22□□□□□ -0.77
PSMB3-210ENST00000618159 POLIQ9UNA4 740 aa10.22□□□□□ -0.77
PSMB3-210ENST00000618159 IPPQ9Y573 584 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms