RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 SAMD15Q9P1V8 674 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 PRKAR2AP13861 404 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 PPARAQ07869 468 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 POLD3Q15054 466 aaPredicted RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 NRSN1Q8IZ57 195 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 RMDN3Q96TC7 470 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 EYA1Q99502 592 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 KRCC1Q9NPI7 259 aaPredicted RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 INTS7Q9NVH2 962 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 SGCGQ13326 291 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 CLEC16AQ2KHT3 1053 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 TEX35Q5T0J7 233 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 PKN3Q6P5Z2 889 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 PRPF39Q86UA1 669 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 TLK2Q86UE8 772 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 BBS7Q8IWZ6 715 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ABHD8Q96I13 439 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 FSD1LQ9BXM9 530 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 TRIM7Q9C029 511 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 TRIM66O15016 1216 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 VEGFDO43915 354 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ALDH2P05091 517 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 CLK3P49761 638 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 LMAN2Q12907 356 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 FAM47EQ6ZV65 393 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ACOT1Q86TX2 421 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 RHPN2Q8IUC4 686 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 BSNDQ8WZ55 320 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ST7Q9NRC1 585 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 C6orf203Q9P0P8 240 aaPredicted RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 SF3B1O75533 1304 aaKnown RBP eCLIP3.58□□□□□ -1.84
LPP-220ENST00000617246 OR52Z1P0C646 297 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 RPL21P46778 160 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 ANXA11P50995 505 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 CNPY4Q8N129 248 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 PABPC5Q96DU9 382 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 GTPBP2Q9BX10 602 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 SLIT2O94813 1529 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 NEMP2A6NFY4 417 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 SNTNA6NMZ2 147 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ZNF24P17028 368 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 PPP2R5EQ16537 467 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 MAP9Q49MG5 647 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 IL27RAQ6UWB1 636 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ERICH1Q86X53 443 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 DNERQ8NFT8 737 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 INTS10Q9NVR2 710 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 TRAV19A0A0A6YYK7 116 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 SFTPCP11686 197 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 MYL4P12829 197 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 DDX6P26196 483 aaKnown RBP eCLIP3.58□□□□□ -1.84
LPP-220ENST00000617246 SBK1Q52WX2 424 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 C16orf62Q7Z3J2 963 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 SMAP1Q8IYB5 467 aaPredicted RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 ENOX1Q8TC92 643 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 SETD7Q8WTS6 366 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 HLA-CQ95604 372 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 CRYL1Q9Y2S2 319 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 LTBP3Q9NS15 1303 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 CNTNAP2Q9UHC6 1331 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 KIAA0391O15091 583 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 PRELPP51888 382 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 HPCAP84074 193 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ZBTB16Q05516 673 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ARHGAP29Q52LW3 1261 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 PHC3Q8NDX5 983 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 SEC14L1Q92503 715 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 FAM149B1Q96BN6 582 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 THUMPD2Q9BTF0 503 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 MAGEB5Q9BZ81 275 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 COPS7BQ9H9Q2 264 aaPredicted RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 PADI2Q9Y2J8 665 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ZNF831Q5JPB2 1677 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 MYO1DO94832 1006 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 GNA14O95837 355 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ALOX5P09917 674 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 NASPP49321 788 aaPredicted RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 SARSP49591 514 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 CYP26C1Q6V0L0 522 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 SLC36A4Q6YBV0 504 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 OR6B3Q8NGW1 331 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 DEFB129Q9H1M3 183 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 HIPK3Q9H422 1215 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 FOCADQ5VW36 1801 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 HBP1O60381 514 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 FGAP02671 866 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 MBL2P11226 248 aaPredicted RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 VAMP7P51809 220 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 PCBP1Q15365 356 aaKnown RBP eCLIP3.58□□□□□ -1.84
LPP-220ENST00000617246 ANKRD20A2Q5SQ80 823 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ANKRD20A3Q5VUR7 823 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 PLPP4Q5VZY2 271 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 PPP1R21Q6ZMI0 780 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 LEMD2Q8NC56 503 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 LNPKQ9C0E8 428 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 MCOLN1Q9GZU1 580 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 PEX12O00623 359 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 NPTXRO95502 500 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 GARTP22102 1010 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 MARK3P27448 753 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms