RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 SLC16A4O15374 487 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 POMCP01189 267 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 BMP1P13497 986 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 AKAP5P24588 427 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 MLH1P40692 756 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 TFF2Q03403 129 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 DSC1Q08554 894 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 ADAM15Q13444 863 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 PKP1Q13835 747 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 EEF1DP3Q658K8 133 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 CCDC73Q6ZRK6 1079 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 MICAL1Q8TDZ2 1067 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 TMEM169Q96HH4 297 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 ZFP42Q96MM3 310 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 FAM193BQ96PV7 902 aaPredicted RBP17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 MIOSQ9NXC5 875 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 DNAJB4Q9UDY4 337 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 CFAP45Q9UL16 551 aa17.01■□□□□ 0.31
SRGAP2C-205ENST00000617209 BDP1A6H8Y1 2624 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 TRIP11Q15643 1979 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 NT5C1B-RDH14C9J2C7 533 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 B4GALT3O60512 393 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 CUTAO60888 179 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 MAPTP10636 758 aaKnown RBP17■□□□□ 0.31
SRGAP2C-205ENST00000617209 LIG1P18858 919 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 PROZP22891 400 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 ABCD1P33897 745 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 SLC11A1P49279 550 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 NCKAP1LP55160 1127 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 DHX8Q14562 1220 aaKnown RBP17■□□□□ 0.31
SRGAP2C-205ENST00000617209 TMEM132AQ24JP5 1023 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 LEXMQ3ZCV2 418 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 ZPBP2Q6X784 338 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 DDX53Q86TM3 631 aaKnown RBP17■□□□□ 0.31
SRGAP2C-205ENST00000617209 COLGALT2Q8IYK4 626 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 EFHBQ8N7U6 833 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 KCNG4Q8TDN1 519 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 CDCA3Q99618 268 aaPredicted RBP17■□□□□ 0.31
SRGAP2C-205ENST00000617209 PARVGQ9HBI0 331 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 PARP2Q9UGN5 583 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 USP20Q9Y2K6 914 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 FAN1Q9Y2M0 1017 aa17■□□□□ 0.31
SRGAP2C-205ENST00000617209 NRP1O14786 923 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 BRD1O95696 1058 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 LTBRP36941 435 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 SCNN1GP51170 649 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 STRN3Q13033 797 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 BMS1Q14692 1282 aaKnown RBP16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 FOXD4L5Q5VV16 416 aaPredicted RBP16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 SV2BQ7L1I2 683 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 TMC7Q7Z402 723 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 HAUS6Q7Z4H7 955 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 MRPL43Q8N983 215 aaKnown RBP16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 FOXD4L4Q8WXT5 416 aaPredicted RBP16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 TCF25Q9BQ70 676 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 TARS2Q9BW92 718 aaKnown RBP16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 APOL6Q9BWW8 343 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 COL25A1Q9BXS0 654 aaPredicted RBP16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 GBP3Q9H0R5 595 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 TLE6Q9H808 572 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 SNTG2Q9NY99 539 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 RCOR1Q9UKL0 485 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 IRAK3Q9Y616 596 aa16.99■□□□□ 0.31
SRGAP2C-205ENST00000617209 ABLIM1O14639 778 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 TRAK2O60296 914 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 NR1I2O75469 434 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 TOM1L1O75674 476 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 FAM13AO94988 1023 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 KRT18P05783 430 aaKnown RBP16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 MCF2P10911 925 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 KCNA5P22460 613 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 CACNB1Q02641 598 aaPredicted RBP16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 GRIK3Q13003 919 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 BECN1Q14457 450 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 PUS10Q3MIT2 529 aaKnown RBP16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 AXDND1Q5T1B0 1012 aaPredicted RBP16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 ADGRD2Q7Z7M1 963 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 TMEM173Q86WV6 379 aaPredicted RBP16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 MYCT1Q8N699 235 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 ST6GALNAC4Q9H4F1 302 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 CLDND1Q9NY35 253 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 ZDHHC9Q9Y397 364 aa16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 TCF20Q9UGU0 1960 aaKnown RBP16.98■□□□□ 0.31
SRGAP2C-205ENST00000617209 DLL1O00548 723 aa16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 RECQL4O94761 1208 aa16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 EFEMP2O95967 443 aa16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 GRM5P41594 1212 aa16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 NRIP1P48552 1158 aa16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 KCNC3Q14003 757 aa16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 SMC1AQ14683 1233 aaKnown RBP16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 DUSP6Q16828 381 aa16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 MPZL3Q6UWV2 235 aa16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 TMEM184AQ6ZMB5 413 aa16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 BCL7CQ8WUZ0 217 aaPredicted RBP16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 DNAJC19Q96DA6 116 aa16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 RPS6KC1Q96S38 1066 aa16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 FIZ1Q96SL8 496 aa16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 TCHPQ9BT92 498 aa16.97■□□□□ 0.31
SRGAP2C-205ENST00000617209 PANK2Q9BZ23 570 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms