RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ATP8B4Q8TF62 1192 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 TATDN2Q93075 761 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 CAPZA3Q96KX2 299 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 L2HGDHQ9H9P8 463 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 PLCB1Q9NQ66 1216 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 AIPL1Q9NZN9 384 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 SUCLA2Q9P2R7 463 aaPredicted RBP8.46□□□□□ -1.06
NEK3-207ENST00000617054 MORF4L1Q9UBU8 362 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 CTAGE9A4FU28 777 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 INO80B-WBP1J3KQ70 363 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 CTIFO43310 598 aaKnown RBP8.45□□□□□ -1.06
NEK3-207ENST00000617054 NCK2O43639 380 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 KRT86O43790 486 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 STRNO43815 780 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 TNNI1P19237 187 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 KLRC1P26715 233 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 CTGFP29279 349 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 SSTR3P32745 418 aaPredicted RBP8.45□□□□□ -1.06
NEK3-207ENST00000617054 COPB2P35606 906 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 MXI1P50539 228 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 TERF1P54274 439 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 ACVR2BQ13705 512 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 PPP2R5AQ15172 486 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 BRDTQ58F21 947 aaPredicted RBP8.45□□□□□ -1.06
NEK3-207ENST00000617054 SPOPLQ6IQ16 392 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 CRELD2Q6UXH1 353 aaPredicted RBP8.45□□□□□ -1.06
NEK3-207ENST00000617054 GLYCTKQ8IVS8 523 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 GPD1LQ8N335 351 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 DHX38Q92620 1227 aaKnown RBP8.45□□□□□ -1.06
NEK3-207ENST00000617054 INO80BQ9C086 356 aaPredicted RBP8.45□□□□□ -1.06
NEK3-207ENST00000617054 ARHGAP39Q9C0H5 1083 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 C17orf75Q9HAS0 396 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 APEX2Q9UBZ4 518 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 AGO2Q9UKV8 859 aaKnown RBP8.45□□□□□ -1.06
NEK3-207ENST00000617054 PLXNA1Q9UIW2 1896 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 LRRC37A2A6NM11 1700 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 F8VZ95 297 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 DYNC1I1O14576 645 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 FGFR4P22455 802 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 NAMPTP43490 491 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 JAM2P57087 298 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 CDK17Q00537 523 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 PPP2R3AQ06190 1150 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 CYP24A1Q07973 514 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 KIAA0753Q2KHM9 967 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 SV2AQ7L0J3 742 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 CEP120Q8N960 986 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 MORC4Q8TE76 937 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 SLC20A1Q8WUM9 679 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 SMARCAD1Q9H4L7 1026 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 PACSIN2Q9UNF0 486 aaPredicted RBP8.45□□□□□ -1.06
NEK3-207ENST00000617054 DIS3Q9Y2L1 958 aaKnown RBP8.45□□□□□ -1.06
NEK3-207ENST00000617054 MRFAP1Q9Y605 127 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 PLXNB2O15031 1838 aa8.45□□□□□ -1.06
NEK3-207ENST00000617054 LGR5O75473 907 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 EPC2Q52LR7 807 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 TAF3Q5VWG9 929 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 RGMBQ6NW40 437 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 KCNV1Q6PIU1 500 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 MSTO1Q9BUK6 570 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 RNF19AQ9NV58 838 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 TAS2R14Q9NYV8 317 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 ERAP1Q9NZ08 941 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 SMARCAL1Q9NZC9 954 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 H3BRB1 525 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 ADCY3O60266 1144 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 GH1P01241 217 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 CHRM1P11229 460 aaPredicted RBP8.44□□□□□ -1.06
NEK3-207ENST00000617054 ABCB4P21439 1286 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 BEX3Q00994 111 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 CRHR2Q13324 411 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 SLC18A3Q16572 532 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 CYP4F22Q6NT55 531 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 PLPPR4Q7Z2D5 763 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 TMEM192Q8IY95 271 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 THNSL1Q8IYQ7 743 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 MNS1Q8NEH6 495 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 U2AF1L4Q8WU68 220 aaKnown RBP8.44□□□□□ -1.06
NEK3-207ENST00000617054 PSPC1Q8WXF1 523 aaKnown RBP8.44□□□□□ -1.06
NEK3-207ENST00000617054 SECISBP2LQ93073 1101 aaKnown RBP8.44□□□□□ -1.06
NEK3-207ENST00000617054 C16orf70Q9BSU1 422 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 MAF1Q9H063 256 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 TUT1Q9H6E5 874 aaKnown RBP8.44□□□□□ -1.06
NEK3-207ENST00000617054 SETD4Q9NVD3 440 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 EHD2Q9NZN4 543 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 AKT3Q9Y243 479 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 SLC45A1Q9Y2W3 748 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 A6NJR5 290 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 ZNF233A6NK53 670 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 DDX3XO00571 662 aaKnown RBP eCLIP8.44□□□□□ -1.062e-8■□□□□ 8.3
NEK3-207ENST00000617054 CLDN3O15551 220 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 MSCO60682 206 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 SOX5P35711 763 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 STAT1P42224 750 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 MRPS25P82663 173 aaKnown RBP8.44□□□□□ -1.06
NEK3-207ENST00000617054 LAMC2Q13753 1193 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 C12orf56Q8IXR9 622 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 OR6J1Q8NGC5 347 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 IQCDQ96DY2 449 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 CPB2Q96IY4 423 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms