RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 SCARF1Q14162 830 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 GSTA3Q16772 222 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 PARP6Q2NL67 630 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 NXNQ6DKJ4 435 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 ANKRD23Q86SG2 305 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 SGMS1Q86VZ5 419 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 SFR1Q86XK3 245 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 CCDC89Q8N998 374 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 EDEM3Q9BZQ6 932 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 GINM1Q9NU53 330 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 CCPG1Q9ULG6 757 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 DIS3Q9Y2L1 958 aaKnown RBP14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 USP1O94782 785 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 CIITAP33076 1130 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 OASLQ15646 514 aaKnown RBP14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 BBS9Q3SYG4 887 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 PDZD8Q8NEN9 1154 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 PLBD2Q8NHP8 589 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 PYDC1Q8WXC3 89 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 ZNF333Q96JL9 665 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 ZNF229Q9UJW7 825 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 WDR17Q8IZU2 1322 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 NDUFB5O43674 189 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 PAEPP09466 180 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 PHKA1P46020 1223 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 TMEM62Q0P6H9 643 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 CAVIN4Q5BKX8 364 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 LPCAT2Q7L5N7 544 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 NEK8Q86SG6 692 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 SATL1Q86VE3 508 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 RFFLQ8WZ73 363 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 TUBGCP5Q96RT8 1024 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 FAM118BQ9BPY3 351 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 GID8Q9NWU2 228 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 TUBA8Q9NY65 449 aaPredicted RBP14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 TXNDC16Q9P2K2 825 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 GLI2P10070 1586 aa14.38□□□□□ -0.11
PPP4R3B-205ENST00000616288 ADCY6O43306 1168 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 AP1B1Q10567 949 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 CTTNQ14247 550 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 STAT4Q14765 748 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 POTEEQ6S8J3 1075 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 CRLF3Q8IUI8 442 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 STKLD1Q8NE28 680 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 BAZ2BQ9UIF8 2168 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 MYH10P35580 1976 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 LOC100653049A0A140TA62 436 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 KRT34O76011 436 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 HARSP12081 509 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 LGSNQ5TDP6 509 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 RINLQ6ZS11 566 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 RBM46Q8TBY0 533 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 KLHL4Q9C0H6 718 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 LRMDAQ9H2I8 198 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 EMILIN3Q9NT22 766 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 WARS2Q9UGM6 360 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 MYH8P13535 1937 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 CYP2D7A0A087X1C5 515 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 SMIM31A0A1B0GVY4 71 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 USP17L12C9JPN9 530 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 USP17L21D6R901 530 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 BOLA2-SMG1P6H3BVE0 249 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 CDK7P50613 346 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 UBE3CQ15386 1083 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 FIGNQ5HY92 759 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 RNF43Q68DV7 783 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 SLF2Q8IX21 1173 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 SPATA5Q8NB90 893 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 DGCR14Q96DF8 476 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 SNF8Q96H20 258 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 ZNF317Q96PQ6 595 aaPredicted RBP14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 ECSITQ9BQ95 431 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 STK33Q9BYT3 514 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 BHMT2Q9H2M3 363 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 DDX28Q9NUL7 540 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 NAGPAQ9UK23 515 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 MIF4GDA9UHW6 222 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 SLC9A1P19634 815 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 EIF4BP23588 611 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 DNAL1Q4LDG9 190 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 PRPF39Q86UA1 669 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 REXO1Q8N1G1 1221 aaKnown RBP14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 PYROXD1Q8WU10 500 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 OSGEPQ9NPF4 335 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 CYLDQ9NQC7 956 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 NAALADL1Q9UQQ1 740 aa14.37□□□□□ -0.11
PPP4R3B-205ENST00000616288 POGZQ7Z3K3 1410 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 PALM3A6NDB9 673 aaPredicted RBP14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 MAP3K13O43283 966 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 FECHP22830 423 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 PDIA5Q14554 519 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 DSTYKQ6XUX3 929 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 UNC13DQ70J99 1090 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 ZBED8Q8IZ13 594 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 BARX2Q9UMQ3 279 aaPredicted RBP14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 JAG2Q9Y219 1238 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 TACC3Q9Y6A5 838 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 MAN1A2O60476 641 aa14.36□□□□□ -0.11
PPP4R3B-205ENST00000616288 CREB1P16220 341 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms