RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 ANKMY2Q8IV38 441 aa16.67■□□□□ 0.26
SYNRG-223ENST00000616179 NUP85Q9BW27 656 aa16.67■□□□□ 0.26
SYNRG-223ENST00000616179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.67■□□□□ 0.266e-7■■□□□ 13.3
SYNRG-223ENST00000616179 MARCOQ9UEW3 520 aaPredicted RBP16.67■□□□□ 0.26
SYNRG-223ENST00000616179 MYH6P13533 1939 aa16.67■□□□□ 0.26
SYNRG-223ENST00000616179 PCP11498 1178 aaKnown RBP16.67■□□□□ 0.26
SYNRG-223ENST00000616179 IZUMO3Q5VZ72 239 aa16.67■□□□□ 0.26
SYNRG-223ENST00000616179 PALM2Q8IXS6 379 aa16.67■□□□□ 0.26
SYNRG-223ENST00000616179 SLC30A5Q8TAD4 765 aa16.67■□□□□ 0.26
SYNRG-223ENST00000616179 SLC26A7Q8TE54 656 aa16.67■□□□□ 0.26
SYNRG-223ENST00000616179 SCFD1Q8WVM8 642 aa16.67■□□□□ 0.26
SYNRG-223ENST00000616179 DTNBP1Q96EV8 351 aa16.67■□□□□ 0.26
SYNRG-223ENST00000616179 FAM210AQ96ND0 272 aa16.67■□□□□ 0.26
SYNRG-223ENST00000616179 USP17L15C9J2P7 530 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 USP17L13C9JLJ4 530 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 USP17L11C9JVI0 530 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 USP17L18D6R9N7 530 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 USP17L22D6RA61 530 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 USP17L17D6RBQ6 530 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 USP17L19D6RCP7 530 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 USP17L20D6RJB6 530 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 I3L4J1 428 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 HNRNPRO43390 633 aaKnown RBP16.66■□□□□ 0.26
SYNRG-223ENST00000616179 GSTA2P09210 222 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 PYGBP11216 843 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 ATP6V1B1P15313 513 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 USP17L24Q0WX57 530 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 GRM4Q14833 912 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 USP17L6PQ6QN14 398 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 GRK7Q8WTQ7 553 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 SNF8Q96H20 258 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 ZNF512BQ96KM6 892 aaPredicted RBP16.66■□□□□ 0.26
SYNRG-223ENST00000616179 CFAP57Q96MR6 1250 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 RBM15Q96T37 977 aaKnown RBP eCLIP16.66■□□□□ 0.26
SYNRG-223ENST00000616179 ERVV-2B6SEH9 535 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 ADAMTS2O95450 1211 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 MTFR1Q15390 333 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 IRF2BP2Q7Z5L9 587 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 MYLK4Q86YV6 388 aaPredicted RBP16.66■□□□□ 0.26
SYNRG-223ENST00000616179 CYP4F11Q9HBI6 524 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 ARMCX1Q9P291 453 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 PDP2Q9P2J9 529 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 CNOT7Q9UIV1 285 aaKnown RBP16.66■□□□□ 0.26
SYNRG-223ENST00000616179 ADAMTS13Q76LX8 1427 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 PYGMP11217 842 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 KLRC3Q07444 240 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 ARHGAP18Q8N392 663 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 NME8Q8N427 588 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 ZNF564Q8TBZ8 553 aaPredicted RBP16.66■□□□□ 0.26
SYNRG-223ENST00000616179 ANAPC4Q9UJX5 808 aa16.66■□□□□ 0.26
SYNRG-223ENST00000616179 ANKRD63C9JTQ0 380 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 AKAP3O75969 853 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 PTPN4P29074 926 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 CHKAP35790 457 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 PSMC4P43686 418 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 RFWD3Q6PCD5 774 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 ZBED8Q8IZ13 594 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 MMTAG2Q9BU76 263 aaKnown RBP16.65■□□□□ 0.26
SYNRG-223ENST00000616179 CLIC5Q9NZA1 410 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 ANAPC7Q9UJX3 599 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 DIP2CQ9Y2E4 1556 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 C3P01024 1663 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 RBAK-RBAKDNI3L0D1 243 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 PEX11AO75192 247 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 RRP1BQ14684 758 aaKnown RBP16.65■□□□□ 0.26
SYNRG-223ENST00000616179 FAM178BQ8IXR5 827 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 PRELID2Q8N945 189 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 FNBP1Q96RU3 617 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 WDR35Q9P2L0 1181 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 CCDC195A0A1B0GUA6 201 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 DDX39AO00148 427 aaKnown RBP16.65■□□□□ 0.26
SYNRG-223ENST00000616179 TMEM253P0C7T8 217 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 GCLMP48507 274 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 LRRC57Q8N9N7 239 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 KLHL11Q9NVR0 708 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 TRAF3IP3Q9Y228 551 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 TUBGCP6Q96RT7 1819 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 TCRBV7S2A1N4TA0A589 114 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 CYTH3O43739 400 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 CCNFP41002 786 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 SLC34A1Q06495 639 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 PSMD6Q15008 389 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 C2CD6Q53TS8 623 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 SDCCAG8Q86SQ7 713 aaPredicted RBP16.65■□□□□ 0.26
SYNRG-223ENST00000616179 SLC13A5Q86YT5 568 aaPredicted RBP16.65■□□□□ 0.26
SYNRG-223ENST00000616179 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.65■□□□□ 0.26
SYNRG-223ENST00000616179 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
SYNRG-223ENST00000616179 RPTORQ8N122 1335 aa16.64■□□□□ 0.25
SYNRG-223ENST00000616179 ZWINTO95229 277 aa16.64■□□□□ 0.25
SYNRG-223ENST00000616179 TBC1D16Q8TBP0 767 aa16.64■□□□□ 0.25
SYNRG-223ENST00000616179 RBM46Q8TBY0 533 aaKnown RBP16.64■□□□□ 0.25
SYNRG-223ENST00000616179 SLC20A1Q8WUM9 679 aa16.64■□□□□ 0.25
SYNRG-223ENST00000616179 BICD1Q96G01 975 aa16.64■□□□□ 0.25
SYNRG-223ENST00000616179 SHCBP1LQ9BZQ2 653 aa16.64■□□□□ 0.25
SYNRG-223ENST00000616179 TMEM59LQ9UK28 342 aa16.64■□□□□ 0.25
SYNRG-223ENST00000616179 TTC4O95801 387 aa16.64■□□□□ 0.25
SYNRG-223ENST00000616179 POTEJP0CG39 1038 aa16.64■□□□□ 0.25
SYNRG-223ENST00000616179 NMT1P30419 496 aaKnown RBP16.64■□□□□ 0.25
SYNRG-223ENST00000616179 MED21Q13503 144 aa16.64■□□□□ 0.25
SYNRG-223ENST00000616179 KCTD1Q719H9 257 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms