RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 ERVK-9P63128 1117 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 DPYDQ12882 1025 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 SPIDRQ14159 915 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 MOGQ16653 247 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 GEN1Q17RS7 908 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 RSPO4Q2I0M5 234 aaPredicted RBP3.27□□□□□ -1.89
CBWD3-209ENST00000614377 ARL13BQ3SXY8 428 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 CDONQ4KMG0 1287 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 EFHC2Q5JST6 749 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 TTC39AQ5SRH9 613 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 ZNF704Q6ZNC4 412 aaPredicted RBP3.27□□□□□ -1.89
CBWD3-209ENST00000614377 CHSY3Q70JA7 882 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 IKBIPQ70UQ0 350 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 GALNT13Q8IUC8 556 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 EPHX4Q8IUS5 362 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 CEP112Q8N8E3 955 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 SCAIQ8N9R8 606 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 ZNF540Q8NDQ6 660 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 SSH3Q8TE77 659 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 DQX1Q8TE96 717 aaKnown RBP3.27□□□□□ -1.89
CBWD3-209ENST00000614377 IFT81Q8WYA0 676 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 CCT6BQ92526 530 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 KIFAP3Q92845 792 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 COL26A1Q96A83 441 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 MFSD14AQ96MC6 490 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 RMDN3Q96TC7 470 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 NT5C3AQ9H0P0 336 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 GBP3Q9H0R5 595 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 DCTPP1Q9H773 170 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 MMRN2Q9H8L6 949 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 DMAP1Q9NPF5 467 aaPredicted RBP3.27□□□□□ -1.89
CBWD3-209ENST00000614377 MAN1C1Q9NR34 630 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 SDHAF3Q9NRP4 125 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 TBCCD1Q9NVR7 557 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 STK32BQ9NY57 414 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 MIS18AQ9NYP9 233 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 NDUFA13Q9P0J0 144 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 MAPRE3Q9UPY8 281 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 RTCBQ9Y3I0 505 aaKnown RBP3.27□□□□□ -1.89
CBWD3-209ENST00000614377 FAM169AQ9Y6X4 670 aa3.27□□□□□ -1.89
CBWD3-209ENST00000614377 POLA1P09884 1462 aaPredicted RBP3.26□□□□□ -1.89
CBWD3-209ENST00000614377 A0A087WZG4 1122 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 hCG_1642624A0A1W2PR95 340 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 FRMD3A2A2Y4 597 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 H3BQF6 201 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 PSMD14O00487 310 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 PDPK1O15530 556 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 CCNT1O60563 726 aaKnown RBP3.26□□□□□ -1.89
CBWD3-209ENST00000614377 PTCD1O75127 700 aaKnown RBP3.26□□□□□ -1.89
CBWD3-209ENST00000614377 EPN2O95208 641 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 FKBP9O95302 570 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 ASMTLO95671 621 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 MT-ND3P03897 115 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 PGRP06401 933 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 RETP07949 1114 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 CTSHP09668 335 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 ZKSCAN1P17029 563 aaPredicted RBP3.26□□□□□ -1.89
CBWD3-209ENST00000614377 ZNF3P17036 446 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 IL32P24001 234 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 AXLP30530 894 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 CETN2P41208 172 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 IREB2P48200 963 aaKnown RBP3.26□□□□□ -1.89
CBWD3-209ENST00000614377 SERPINB8P50452 374 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 AK2P54819 239 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 MTTPP55157 894 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 PDE1BQ01064 536 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 AP1B1Q10567 949 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 MTX1Q13505 466 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 UBAP2LQ14157 1087 aaKnown RBP3.26□□□□□ -1.89
CBWD3-209ENST00000614377 MTERF2Q49AM1 385 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 ODF2Q5BJF6 829 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 IGSF11Q5DX21 431 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 CMPK2Q5EBM0 449 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 KRBOX4Q5JUW0 171 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 ARTNQ5T4W7 220 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 C11orf88Q6PI97 169 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 POMZP3Q6PJE2 187 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 CCDC81Q6ZN84 652 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 B4GALNT4Q76KP1 1039 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 KRT27Q7Z3Y8 459 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 PPP1R42Q7Z4L9 355 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 NIM1KQ8IY84 436 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 SYTL1Q8IYJ3 562 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 COLGALT2Q8IYK4 626 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 NRSN1Q8IZ57 195 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 KIRREL3Q8IZU9 778 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 AFAP1L2Q8N4X5 818 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 NAT8LQ8N9F0 302 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 BCAS4Q8TDM0 211 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 DENND1AQ8TEH3 1009 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 HNRNPLLQ8WVV9 542 aaKnown RBP3.26□□□□□ -1.89
CBWD3-209ENST00000614377 ANKS1AQ92625 1134 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 SGK3Q96BR1 496 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 TIFAQ96CG3 184 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 SLC47A1Q96FL8 570 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 SPATA17Q96L03 361 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 MPHOSPH8Q99549 860 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 MYD88Q99836 296 aa3.26□□□□□ -1.89
CBWD3-209ENST00000614377 TREX2Q9BQ50 279 aaPredicted RBP3.26□□□□□ -1.89
CBWD3-209ENST00000614377 MXD3Q9BW11 206 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms