RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ANHXE9PGG2 379 aa26.13■■□□□ 1.77
MMP28-203ENST00000612672 LMNAP02545 664 aaKnown RBP26.13■■□□□ 1.77
MMP28-203ENST00000612672 LAMP2P13473 410 aa26.13■■□□□ 1.77
MMP28-203ENST00000612672 PTENP60484 403 aa26.13■■□□□ 1.77
MMP28-203ENST00000612672 EARS2Q5JPH6 523 aaKnown RBP26.13■■□□□ 1.77
MMP28-203ENST00000612672 CYP26C1Q6V0L0 522 aa26.13■■□□□ 1.77
MMP28-203ENST00000612672 CDR2LQ86X02 465 aaPredicted RBP26.13■■□□□ 1.77
MMP28-203ENST00000612672 C4orf19Q8IY42 314 aa26.13■■□□□ 1.77
MMP28-203ENST00000612672 TRIM22Q8IYM9 498 aa26.13■■□□□ 1.77
MMP28-203ENST00000612672 ASAP3Q8TDY4 903 aa26.13■■□□□ 1.77
MMP28-203ENST00000612672 STAMQ92783 540 aa26.13■■□□□ 1.77
MMP28-203ENST00000612672 SLKQ9H2G2 1235 aaPredicted RBP26.13■■□□□ 1.77
MMP28-203ENST00000612672 ARHGEF3Q9NR81 526 aa26.13■■□□□ 1.77
MMP28-203ENST00000612672 CYP4A11Q02928 519 aa26.12■■□□□ 1.77
MMP28-203ENST00000612672 MBTD1Q05BQ5 628 aa26.12■■□□□ 1.77
MMP28-203ENST00000612672 CTTNQ14247 550 aaKnown RBP26.12■■□□□ 1.77
MMP28-203ENST00000612672 FUT10Q6P4F1 479 aa26.12■■□□□ 1.77
MMP28-203ENST00000612672 KRT25Q7Z3Z0 450 aa26.12■■□□□ 1.77
MMP28-203ENST00000612672 POTEDQ86YR6 584 aa26.12■■□□□ 1.77
MMP28-203ENST00000612672 KIAA2013Q8IYS2 634 aa26.12■■□□□ 1.77
MMP28-203ENST00000612672 KCNG4Q8TDN1 519 aa26.12■■□□□ 1.77
MMP28-203ENST00000612672 OXER1Q8TDS5 423 aa26.12■■□□□ 1.77
MMP28-203ENST00000612672 PAAF1Q9BRP4 392 aa26.12■■□□□ 1.77
MMP28-203ENST00000612672 SSX2IPQ9Y2D8 614 aa26.12■■□□□ 1.77
MMP28-203ENST00000612672 NUMBLQ9Y6R0 609 aa26.12■■□□□ 1.77
MMP28-203ENST00000612672 FAM205CA6NFA0 338 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 B4GALT5O43286 388 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 GAS2O43903 313 aaKnown RBP26.11■■□□□ 1.77
MMP28-203ENST00000612672 ERLIN2O94905 339 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 SP9P0CG40 484 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 AKAP5P24588 427 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 STK3Q13188 491 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 CAPSQ13938 189 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 EPHA7Q15375 998 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 XKR9Q5GH70 373 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 CNNM3Q8NE01 707 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 FAM20AQ96MK3 541 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 PRKD2Q9BZL6 878 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 CSRNP2Q9H175 543 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 UBN1Q9NPG3 1134 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 PPME1Q9Y570 386 aa26.11■■□□□ 1.77
MMP28-203ENST00000612672 ARF4P18085 180 aaPredicted RBP26.1■■□□□ 1.77
MMP28-203ENST00000612672 NTHL1P78549 312 aa26.1■■□□□ 1.77
MMP28-203ENST00000612672 RTP2Q5QGT7 225 aa26.1■■□□□ 1.77
MMP28-203ENST00000612672 NCAPH2Q6IBW4 605 aa26.1■■□□□ 1.77
MMP28-203ENST00000612672 PHLDB3Q6NSJ2 640 aa26.1■■□□□ 1.77
MMP28-203ENST00000612672 NOTUMQ6P988 496 aa26.1■■□□□ 1.77
MMP28-203ENST00000612672 PRSS55Q6UWB4 352 aaPredicted RBP26.1■■□□□ 1.77
MMP28-203ENST00000612672 RUFY3Q7L099 469 aa26.1■■□□□ 1.77
MMP28-203ENST00000612672 MAML2Q8IZL2 1156 aaPredicted RBP26.1■■□□□ 1.77
MMP28-203ENST00000612672 DCLK2Q8N568 766 aa26.1■■□□□ 1.77
MMP28-203ENST00000612672 HDAC7Q8WUI4 952 aa26.1■■□□□ 1.77
MMP28-203ENST00000612672 FGF14Q92915 247 aa26.1■■□□□ 1.77
MMP28-203ENST00000612672 MTRQ99707 1265 aa26.1■■□□□ 1.77
MMP28-203ENST00000612672 PHF20Q9BVI0 1012 aa26.1■■□□□ 1.77
MMP28-203ENST00000612672 RFX1P22670 979 aa26.09■■□□□ 1.77
MMP28-203ENST00000612672 PPP4R3AQ6IN85 833 aa26.09■■□□□ 1.77
MMP28-203ENST00000612672 CENPQQ7L2Z9 268 aaPredicted RBP26.09■■□□□ 1.77
MMP28-203ENST00000612672 NEK8Q86SG6 692 aa26.09■■□□□ 1.77
MMP28-203ENST00000612672 IFNLR1Q8IU57 520 aaPredicted RBP26.09■■□□□ 1.77
MMP28-203ENST00000612672 TCP11Q8WWU5 503 aa26.09■■□□□ 1.77
MMP28-203ENST00000612672 NXPE3Q969Y0 559 aa26.09■■□□□ 1.77
MMP28-203ENST00000612672 PLEKHA4Q9H4M7 779 aa26.09■■□□□ 1.77
MMP28-203ENST00000612672 PIDD1Q9HB75 910 aa26.09■■□□□ 1.77
MMP28-203ENST00000612672 ZSWIM6Q9HCJ5 1215 aa26.09■■□□□ 1.77
MMP28-203ENST00000612672 SLC2A4RGQ9NR83 387 aa26.09■■□□□ 1.77
MMP28-203ENST00000612672 ZDHHC7Q9NXF8 308 aa26.09■■□□□ 1.77
MMP28-203ENST00000612672 KLK14Q9P0G3 267 aa26.09■■□□□ 1.77
MMP28-203ENST00000612672 INO80B-WBP1J3KQ70 363 aa26.08■■□□□ 1.77
MMP28-203ENST00000612672 ASAP2O43150 1006 aa26.08■■□□□ 1.77
MMP28-203ENST00000612672 DKC1O60832 514 aaKnown RBP eCLIP26.08■■□□□ 1.77
MMP28-203ENST00000612672 PSMA5P28066 241 aa26.08■■□□□ 1.77
MMP28-203ENST00000612672 GALNT17Q6IS24 598 aa26.08■■□□□ 1.77
MMP28-203ENST00000612672 CCDC51Q96ER9 411 aa26.08■■□□□ 1.77
MMP28-203ENST00000612672 CXCL16Q9H2A7 254 aa26.08■■□□□ 1.77
MMP28-203ENST00000612672 FNIP2Q9P278 1114 aa26.08■■□□□ 1.77
MMP28-203ENST00000612672 DPP7Q9UHL4 492 aa26.08■■□□□ 1.77
MMP28-203ENST00000612672 ADAM28Q9UKQ2 775 aa26.08■■□□□ 1.77
MMP28-203ENST00000612672 GIT1Q9Y2X7 761 aa26.08■■□□□ 1.77
MMP28-203ENST00000612672 SIT1Q9Y3P8 196 aa26.08■■□□□ 1.77
MMP28-203ENST00000612672 CCNT1O60563 726 aaKnown RBP26.07■■□□□ 1.76
MMP28-203ENST00000612672 AXLP30530 894 aa26.07■■□□□ 1.76
MMP28-203ENST00000612672 USP41Q3LFD5 358 aa26.07■■□□□ 1.76
MMP28-203ENST00000612672 DCLRE1AQ6PJP8 1040 aa26.07■■□□□ 1.76
MMP28-203ENST00000612672 PARM1Q6UWI2 310 aa26.07■■□□□ 1.76
MMP28-203ENST00000612672 C1orf210Q8IVY1 113 aa26.07■■□□□ 1.76
MMP28-203ENST00000612672 EXOC8Q8IYI6 725 aa26.07■■□□□ 1.76
MMP28-203ENST00000612672 PJA1Q8NG27 643 aa26.07■■□□□ 1.76
MMP28-203ENST00000612672 HASPINQ8TF76 798 aa26.07■■□□□ 1.76
MMP28-203ENST00000612672 ZNF274Q96GC6 653 aaPredicted RBP26.07■■□□□ 1.76
MMP28-203ENST00000612672 COLEC11Q9BWP8 271 aa26.07■■□□□ 1.76
MMP28-203ENST00000612672 SEMA4AQ9H3S1 761 aa26.07■■□□□ 1.76
MMP28-203ENST00000612672 SPTBN2O15020 2390 aa26.06■■□□□ 1.76
MMP28-203ENST00000612672 CCDC194A0A1B0GVG4 234 aa26.06■■□□□ 1.76
MMP28-203ENST00000612672 CPLX1O14810 134 aa26.06■■□□□ 1.76
MMP28-203ENST00000612672 ZMYND10O75800 440 aa26.06■■□□□ 1.76
MMP28-203ENST00000612672 SLITRK3O94933 977 aa26.06■■□□□ 1.76
MMP28-203ENST00000612672 NPTXRO95502 500 aa26.06■■□□□ 1.76
MMP28-203ENST00000612672 GLRA2P23416 452 aa26.06■■□□□ 1.76
MMP28-203ENST00000612672 GPC5P78333 572 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms