RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SCNN1GP51170 649 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 SLC12A3P55017 1021 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 BECN1Q14457 450 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 KARSQ15046 597 aaKnown RBP13.55□□□□□ -0.24
CBWD3-208ENST00000612050 ZNF568Q3ZCX4 644 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 RRAGBQ5VZM2 374 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 KIAA1841Q6NSI8 718 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 KCNK18Q7Z418 384 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 PPFIBP1Q86W92 1011 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 VPS52Q8N1B4 723 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 SPIRE2Q8WWL2 714 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 RAD54LQ92698 747 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 POP1Q99575 1024 aaKnown RBP13.55□□□□□ -0.24
CBWD3-208ENST00000612050 EMILIN2Q9BXX0 1053 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 PDZD7Q9H5P4 517 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 PARVGQ9HBI0 331 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 POLD4Q9HCU8 107 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 CD207Q9UJ71 328 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 CFAP45Q9UL16 551 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 TNFSF13BQ9Y275 285 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 TRANK1O15050 2925 aa13.55□□□□□ -0.24
CBWD3-208ENST00000612050 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-208ENST00000612050 NRP1O14786 923 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 SLC16A4O15374 487 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 CXCL14O95715 111 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 URODP06132 367 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 THP07101 528 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 ZSCAN22P10073 491 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-208ENST00000612050 BMP1P13497 986 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 DDIT3P35638 169 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 STAT6P42226 847 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 SLC11A1P49279 550 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 ERVFC1P60507 584 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 ADAM15Q13444 863 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 CAMK1Q14012 370 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 SLC39A14Q15043 492 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 DUSP6Q16828 381 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 ATL3Q6DD88 541 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 SV2BQ7L1I2 683 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 MYCT1Q8N699 235 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 CASP10Q92851 521 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 LRRC27Q9C0I9 530 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 MRPL17Q9NRX2 175 aaKnown RBP13.54□□□□□ -0.24
CBWD3-208ENST00000612050 KLK14Q9P0G3 267 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 ARHGAP28Q9P2N2 729 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 DNAJB4Q9UDY4 337 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 DPP7Q9UHL4 492 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 PRG3Q9Y2Y8 225 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-208ENST00000612050 MORC2Q9Y6X9 1032 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-208ENST00000612050 ATG2AQ2TAZ0 1938 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 MYH15Q9Y2K3 1946 aa13.54□□□□□ -0.24
CBWD3-208ENST00000612050 SFI1A8K8P3 1242 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 FSCN2O14926 492 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 SPTLC2O15270 562 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 INPPL1O15357 1258 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 DDHD2O94830 711 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 YEATS4O95619 227 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 CTSAP10619 480 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 SMAD4Q13485 552 aaKnown RBP13.53□□□□□ -0.24
CBWD3-208ENST00000612050 COL19A1Q14993 1142 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 PTPAQ15257 358 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 KYAT1Q16773 422 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 CTC1Q2NKJ3 1217 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 TPRNQ4KMQ1 711 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 FAM173BQ6P4H8 233 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 ADGRD2Q7Z7M1 963 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 ZNF280BQ86YH2 543 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 MRPL43Q8N983 215 aaKnown RBP13.53□□□□□ -0.24
CBWD3-208ENST00000612050 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 ZFP42Q96MM3 310 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 USP28Q96RU2 1077 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 NTPCRQ9BSD7 190 aaKnown RBP13.53□□□□□ -0.24
CBWD3-208ENST00000612050 SNTG2Q9NY99 539 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 PRKAG3Q9UGI9 489 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 FBXO2Q9UK22 296 aaPredicted RBP13.53□□□□□ -0.24
CBWD3-208ENST00000612050 GDAQ9Y2T3 454 aa13.53□□□□□ -0.24
CBWD3-208ENST00000612050 TCF20Q9UGU0 1960 aaKnown RBP13.52□□□□□ -0.24
CBWD3-208ENST00000612050 GRXCR2A6NFK2 248 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 K7ENM7 598 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 PER2O15055 1255 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 CLDN3O15551 220 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 PPP6R2O75170 966 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 TADA2AO75478 443 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 RECQL4O94761 1208 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 F13A1P00488 732 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 MCF2P10911 925 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 HOXB8P17481 243 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-208ENST00000612050 SSTR3P32745 418 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-208ENST00000612050 NASPP49321 788 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-208ENST00000612050 LIG4P49917 911 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 CREMQ03060 361 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 TUSC3Q13454 348 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 MCM6Q14566 821 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 FOXD4L5Q5VV16 416 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-208ENST00000612050 CES5AQ6NT32 575 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 MPZL3Q6UWV2 235 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 ZPBP2Q6X784 338 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 FAM178BQ8IXR5 827 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 COLGALT2Q8IYK4 626 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms