RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 AP5M1Q9H0R1 490 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 WNT8AQ9H1J5 351 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 FZD1Q9UP38 647 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 UBE4BO95155 1302 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 EPHB6O15197 1021 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 CHRNA3P32297 505 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 COPB2P35606 906 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 MAGOHP61326 146 aaKnown RBP14.04□□□□□ -0.16
TCF3-220ENST00000611869 BBS9Q3SYG4 887 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 CDR2LQ86X02 465 aaPredicted RBP14.04□□□□□ -0.16
TCF3-220ENST00000611869 LRRC71Q8N4P6 559 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 CELF4Q9BZC1 486 aaKnown RBP14.04□□□□□ -0.16
TCF3-220ENST00000611869 THAP2Q9H0W7 228 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 KLHL14Q9P2G3 628 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 ADAMTSL3P82987 1691 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 MAFGO15525 162 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 PPP1R11O60927 126 aaPredicted RBP14.04□□□□□ -0.16
TCF3-220ENST00000611869 PRKCBP05771 671 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 ARL1P40616 181 aaPredicted RBP14.04□□□□□ -0.16
TCF3-220ENST00000611869 TAF12Q16514 161 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 SEZ6Q53EL9 994 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 CFAP157Q5JU67 520 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 ZNF507Q8TCN5 953 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 DNAJC19Q96DA6 116 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 SNX25Q9H3E2 840 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 OLFML3Q9NRN5 406 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.04□□□□□ -0.161e-8■■■■■ 60.5
TCF3-220ENST00000611869 PRPSAP2O60256 369 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 KRT14P02533 472 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 TMEM253P0C7T8 217 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 NFX1Q12986 1120 aaKnown RBP14.04□□□□□ -0.16
TCF3-220ENST00000611869 DARS2Q6PI48 645 aaKnown RBP14.04□□□□□ -0.16
TCF3-220ENST00000611869 USP38Q8NB14 1042 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 KCNMB3Q9NPA1 279 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 BAIAP2L1Q9UHR4 511 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 EXOC1LA0A1B0GW35 172 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 XPOTO43592 962 aaKnown RBP14.04□□□□□ -0.16
TCF3-220ENST00000611869 HLA-DRAP01903 254 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 SLC12A3P55017 1021 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 WDR72Q3MJ13 1102 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 RSRC2Q7L4I2 434 aaKnown RBP14.04□□□□□ -0.16
TCF3-220ENST00000611869 IRF2BP1Q8IU81 584 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 CCDC110Q8TBZ0 833 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 POP1Q99575 1024 aaKnown RBP14.04□□□□□ -0.16
TCF3-220ENST00000611869 TMEM8AQ9HCN3 771 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 KLHL11Q9NVR0 708 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 HPCAL4Q9UM19 191 aa14.04□□□□□ -0.16
TCF3-220ENST00000611869 COMTP21964 271 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 NPTX2P47972 431 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 HP1BP3Q5SSJ5 553 aaPredicted RBP14.03□□□□□ -0.16
TCF3-220ENST00000611869 MMGT1Q8N4V1 131 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.03□□□□□ -0.16
TCF3-220ENST00000611869 TPCN2Q8NHX9 752 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 C2orf40Q9H1Z8 148 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 IGSF9BQ9UPX0 1349 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 PI4K2BG5E9Z4 385 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 NCOA4Q13772 614 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 ECM1Q16610 540 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 PPP6R3Q5H9R7 873 aaPredicted RBP14.03□□□□□ -0.16
TCF3-220ENST00000611869 SUCLA2Q9P2R7 463 aaPredicted RBP14.03□□□□□ -0.16
TCF3-220ENST00000611869 TRAF3IP3Q9Y228 551 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 TJP3O95049 919 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 ABL1P00519 1130 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 RARRES1P49788 294 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 PMS2P54278 862 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 SLC35C1Q96A29 364 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 GPRASP2Q96D09 838 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 STK38LQ9Y2H1 464 aa14.03□□□□□ -0.16
TCF3-220ENST00000611869 SCN11AQ9UI33 1791 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 CALB1P05937 261 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 PSMC1P62191 440 aaKnown RBP14.02□□□□□ -0.16
TCF3-220ENST00000611869 C2CD6Q53TS8 623 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 MIIPQ5JXC2 388 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 LRRC55Q6ZSA7 311 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 CCDC197Q8NCU1 140 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 GDAP1Q8TB36 358 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 ANKZF1Q9H8Y5 726 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 AGO4Q9HCK5 861 aaKnown RBP14.02□□□□□ -0.16
TCF3-220ENST00000611869 OSGEPQ9NPF4 335 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 VIL1P09327 827 aaKnown RBP14.02□□□□□ -0.16
TCF3-220ENST00000611869 EFNA5P52803 228 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 ANKRD20A3Q5VUR7 823 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 WDR59Q6PJI9 974 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 RHOT1Q8IXI2 618 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 OR2W6PQ8NHA6 318 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 HNRNPLLQ8WVV9 542 aaKnown RBP14.02□□□□□ -0.16
TCF3-220ENST00000611869 RBM41Q96IZ5 413 aaKnown RBP14.02□□□□□ -0.16
TCF3-220ENST00000611869 MRIQ9BWK5 157 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 HSD3B7Q9H2F3 369 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 SAYSD1Q9NPB0 183 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 L1RE1Q9UN81 338 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 SIK3Q9Y2K2 1263 aa14.02□□□□□ -0.16
TCF3-220ENST00000611869 GOLGA8MH3BSY2 632 aa14.02□□□□□ -0.17
TCF3-220ENST00000611869 KCNJ1P48048 391 aa14.02□□□□□ -0.17
TCF3-220ENST00000611869 MEA1Q16626 185 aa14.02□□□□□ -0.17
TCF3-220ENST00000611869 C6orf118Q5T5N4 469 aa14.02□□□□□ -0.17
TCF3-220ENST00000611869 MMS22LQ6ZRQ5 1243 aa14.02□□□□□ -0.17
TCF3-220ENST00000611869 MLXIPLQ9NP71 852 aa14.02□□□□□ -0.17
TCF3-220ENST00000611869 CYP26B1Q9NR63 512 aa14.02□□□□□ -0.17
TCF3-220ENST00000611869 ARFGEF2Q9Y6D5 1785 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms