RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 MAPK7Q13164 816 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 BAATQ14032 418 aaPredicted RBP9.29□□□□□ -0.92
LIG4-204ENST00000611712 EEPD1Q7L9B9 569 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 CBWD2Q8IUF1 395 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 SRRM1Q8IYB3 904 aaKnown RBP9.29□□□□□ -0.92
LIG4-204ENST00000611712 GPD1LQ8N335 351 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 FBXO25Q8TCJ0 367 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 NSUN6Q8TEA1 469 aaKnown RBP9.29□□□□□ -0.92
LIG4-204ENST00000611712 CPA5Q8WXQ8 436 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 HVCN1Q96D96 273 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 BTBD6Q96KE9 485 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 DNAI2Q9GZS0 605 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 NXF1Q9UBU9 619 aaKnown RBP9.29□□□□□ -0.92
LIG4-204ENST00000611712 COL18A1P39060 1754 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 P4HA2O15460 535 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 CNGA1P29973 690 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 ZNF131P52739 623 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 C1orf186Q6ZWK4 172 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 TBC1D1Q86TI0 1168 aaPredicted RBP9.28□□□□□ -0.92
LIG4-204ENST00000611712 KLHL29Q96CT2 875 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 ZSWIM1Q9BR11 485 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 TACO1Q9BSH4 297 aaKnown RBP9.28□□□□□ -0.92
LIG4-204ENST00000611712 PI4K2AQ9BTU6 479 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 DBR1Q9UK59 544 aaKnown RBP9.28□□□□□ -0.92
LIG4-204ENST00000611712 TRPC6Q9Y210 931 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 RBAK-RBAKDNI3L0D1 243 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 MARSP56192 900 aaKnown RBP9.28□□□□□ -0.92
LIG4-204ENST00000611712 OSTNP61366 133 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 YWHAEP62258 255 aaKnown RBP9.28□□□□□ -0.92
LIG4-204ENST00000611712 RPS6P62753 249 aaKnown RBP9.28□□□□□ -0.92
LIG4-204ENST00000611712 MXRA7P84157 204 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 NCAPG2Q86XI2 1143 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 CTAGE3PQ8IX95 158 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 XPO6Q96QU8 1125 aaKnown RBP9.28□□□□□ -0.92
LIG4-204ENST00000611712 TAAR1Q96RJ0 339 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 SMC6Q96SB8 1091 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 POLR3FQ9H1D9 316 aaPredicted RBP9.28□□□□□ -0.92
LIG4-204ENST00000611712 KIAA1586Q9HCI6 787 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 TTC7AQ9ULT0 858 aaPredicted RBP9.28□□□□□ -0.92
LIG4-204ENST00000611712 INO80B-WBP1J3KQ70 363 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 NFIBO00712 420 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 CES2O00748 559 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 RNF8O76064 485 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 BRAFP15056 766 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 TKFCQ3LXA3 575 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 SLFN12LQ6IEE8 588 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 STYK1Q6J9G0 422 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 SCARA5Q6ZMJ2 495 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 LRRC8CQ8TDW0 803 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 ARHGEF26Q96DR7 871 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 SEC16BQ96JE7 1060 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 FERMT1Q9BQL6 677 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 INO80BQ9C086 356 aaPredicted RBP9.28□□□□□ -0.92
LIG4-204ENST00000611712 PABPC3Q9H361 631 aaKnown RBP9.28□□□□□ -0.92
LIG4-204ENST00000611712 RPAP3Q9H6T3 665 aaPredicted RBP9.28□□□□□ -0.92
LIG4-204ENST00000611712 SCINQ9Y6U3 715 aa9.28□□□□□ -0.92
LIG4-204ENST00000611712 A0A1B0GUA9 196 aa9.27□□□□□ -0.92
LIG4-204ENST00000611712 WDR46O15213 610 aaKnown RBP9.27□□□□□ -0.92
LIG4-204ENST00000611712 TLR3O15455 904 aaKnown RBP9.27□□□□□ -0.92
LIG4-204ENST00000611712 SRGAP2CP0DJJ0 459 aa9.27□□□□□ -0.92
LIG4-204ENST00000611712 GUCY2CP25092 1073 aa9.27□□□□□ -0.92
LIG4-204ENST00000611712 SLC8A1P32418 973 aa9.27□□□□□ -0.92
LIG4-204ENST00000611712 PHBP35232 272 aa9.27□□□□□ -0.92
LIG4-204ENST00000611712 ACOT2P49753 483 aa9.27□□□□□ -0.92
LIG4-204ENST00000611712 CLK2P49760 499 aaKnown RBP9.27□□□□□ -0.92
LIG4-204ENST00000611712 CLNS1AP54105 237 aaKnown RBP9.27□□□□□ -0.92
LIG4-204ENST00000611712 MTMR2Q13614 643 aa9.27□□□□□ -0.92
LIG4-204ENST00000611712 ENOSF1Q7L5Y1 443 aa9.27□□□□□ -0.92
LIG4-204ENST00000611712 CFAP57Q96MR6 1250 aa9.27□□□□□ -0.92
LIG4-204ENST00000611712 TIPINQ9BVW5 301 aa9.27□□□□□ -0.92
LIG4-204ENST00000611712 SAYSD1Q9NPB0 183 aa9.27□□□□□ -0.92
LIG4-204ENST00000611712 MYH7P12883 1935 aa9.27□□□□□ -0.92
LIG4-204ENST00000611712 AKAP11Q9UKA4 1901 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 IGKV6D-41A0A0C4DH26 115 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 NDC80O14777 642 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 RPS6KA5O75582 802 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 AGTP01019 485 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 CYP3A4P08684 503 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 MUTP22033 750 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 TNFRSF8P28908 595 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 GNA15P30679 374 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 PPP2R5CQ13362 524 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 LONRF1Q17RB8 773 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 HP1BP3Q5SSJ5 553 aaPredicted RBP9.27□□□□□ -0.93
LIG4-204ENST00000611712 SLC13A5Q86YT5 568 aaPredicted RBP9.27□□□□□ -0.93
LIG4-204ENST00000611712 RBM46Q8TBY0 533 aaKnown RBP9.27□□□□□ -0.93
LIG4-204ENST00000611712 SLC5A5Q92911 643 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 SNF8Q96H20 258 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 POP1Q99575 1024 aaKnown RBP9.27□□□□□ -0.93
LIG4-204ENST00000611712 WDR18Q9BV38 432 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 UBXN6Q9BZV1 441 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 TMEM8AQ9HCN3 771 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 AGO2Q9UKV8 859 aaKnown RBP9.27□□□□□ -0.93
LIG4-204ENST00000611712 SNED1Q8TER0 1413 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 COL14A1Q05707 1796 aaKnown RBP9.27□□□□□ -0.93
LIG4-204ENST00000611712 NUP98P52948 1817 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 SPDYE2BA6NHP3 402 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 TISP43B9A030 160 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 AGPSO00116 658 aa9.27□□□□□ -0.93
LIG4-204ENST00000611712 TGFB1I1O43294 461 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms