RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 BHMT2Q9H2M3 363 aa19.54■□□□□ 0.72
MUC1-224ENST00000611577 CCDC39Q9UFE4 941 aa19.54■□□□□ 0.72
MUC1-224ENST00000611577 IGKV6-21A0A0C4DH24 114 aa19.53■□□□□ 0.72
MUC1-224ENST00000611577 E9PMD0 336 aa19.53■□□□□ 0.72
MUC1-224ENST00000611577 ME1P48163 572 aa19.53■□□□□ 0.72
MUC1-224ENST00000611577 DRP2Q13474 957 aa19.53■□□□□ 0.72
MUC1-224ENST00000611577 KIAA1841Q6NSI8 718 aa19.53■□□□□ 0.72
MUC1-224ENST00000611577 PADI6Q6TGC4 694 aa19.53■□□□□ 0.72
MUC1-224ENST00000611577 MAEAQ7L5Y9 396 aa19.53■□□□□ 0.72
MUC1-224ENST00000611577 TMEM173Q86WV6 379 aaPredicted RBP19.53■□□□□ 0.72
MUC1-224ENST00000611577 KCTD17Q8N5Z5 321 aa19.53■□□□□ 0.72
MUC1-224ENST00000611577 NLRP4Q96MN2 994 aa19.53■□□□□ 0.72
MUC1-224ENST00000611577 MORC2Q9Y6X9 1032 aaPredicted RBP19.53■□□□□ 0.72
MUC1-224ENST00000611577 TCHHQ07283 1943 aa19.53■□□□□ 0.72
MUC1-224ENST00000611577 PLXNA3P51805 1871 aa19.52■□□□□ 0.72
MUC1-224ENST00000611577 EPCAMP16422 314 aa19.52■□□□□ 0.72
MUC1-224ENST00000611577 LONRF3Q496Y0 759 aa19.52■□□□□ 0.72
MUC1-224ENST00000611577 ATAT1Q5SQI0 421 aa19.52■□□□□ 0.72
MUC1-224ENST00000611577 HYIQ5T013 277 aa19.52■□□□□ 0.72
MUC1-224ENST00000611577 KANK3Q6NY19 840 aa19.52■□□□□ 0.72
MUC1-224ENST00000611577 ZDHHC14Q8IZN3 488 aa19.52■□□□□ 0.72
MUC1-224ENST00000611577 MCPH1Q8NEM0 835 aa19.52■□□□□ 0.72
MUC1-224ENST00000611577 LPPQ93052 612 aa19.52■□□□□ 0.72
MUC1-224ENST00000611577 SPATA32Q96LK8 384 aa19.52■□□□□ 0.72
MUC1-224ENST00000611577 GCOM2Q9BZD3 368 aaPredicted RBP19.52■□□□□ 0.72
MUC1-224ENST00000611577 MFSD1Q9H3U5 465 aa19.52■□□□□ 0.72
MUC1-224ENST00000611577 LIMD1Q9UGP4 676 aa19.52■□□□□ 0.72
MUC1-224ENST00000611577 COL4A3BPQ9Y5P4 624 aa19.52■□□□□ 0.72
MUC1-224ENST00000611577 PTPRZ1P23471 2315 aaPredicted RBP19.52■□□□□ 0.71
MUC1-224ENST00000611577 PROB1E7EW31 1015 aa19.51■□□□□ 0.71
MUC1-224ENST00000611577 ASAP2O43150 1006 aa19.51■□□□□ 0.71
MUC1-224ENST00000611577 CUTAO60888 179 aa19.51■□□□□ 0.71
MUC1-224ENST00000611577 SFPQP23246 707 aaKnown RBP eCLIP19.51■□□□□ 0.71
MUC1-224ENST00000611577 PHKA2P46019 1235 aa19.51■□□□□ 0.71
MUC1-224ENST00000611577 MXD4Q14582 209 aaPredicted RBP19.51■□□□□ 0.71
MUC1-224ENST00000611577 KARSQ15046 597 aaKnown RBP19.51■□□□□ 0.71
MUC1-224ENST00000611577 TWF2Q6IBS0 349 aaKnown RBP19.51■□□□□ 0.71
MUC1-224ENST00000611577 ZNF410Q86VK4 478 aa19.51■□□□□ 0.71
MUC1-224ENST00000611577 EPSTI1Q96J88 318 aa19.51■□□□□ 0.71
MUC1-224ENST00000611577 PNMA5Q96PV4 448 aa19.51■□□□□ 0.71
MUC1-224ENST00000611577 CCSER1Q9C0I3 900 aa19.51■□□□□ 0.71
MUC1-224ENST00000611577 CHST12Q9NRB3 414 aa19.51■□□□□ 0.71
MUC1-224ENST00000611577 INPP5FQ9Y2H2 1132 aa19.51■□□□□ 0.71
MUC1-224ENST00000611577 SPTBN4Q9H254 2564 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 CTSAP10619 480 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 PLCG1P19174 1290 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 GIT2Q14161 759 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 TFDP1Q14186 410 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 TMEM119Q4V9L6 283 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 ASTLQ6HA08 431 aaPredicted RBP19.5■□□□□ 0.71
MUC1-224ENST00000611577 GLB1LQ6UWU2 654 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 TMC5Q6UXY8 1006 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 ASCL5Q7RTU5 278 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 DDX53Q86TM3 631 aaKnown RBP19.5■□□□□ 0.71
MUC1-224ENST00000611577 PLCD3Q8N3E9 789 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 BCL7CQ8WUZ0 217 aaPredicted RBP19.5■□□□□ 0.71
MUC1-224ENST00000611577 PRPF31Q8WWY3 499 aaKnown RBP19.5■□□□□ 0.71
MUC1-224ENST00000611577 RSPH1Q8WYR4 309 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 IGSF21Q96ID5 467 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 INO80BQ9C086 356 aaPredicted RBP19.5■□□□□ 0.71
MUC1-224ENST00000611577 POLR3FQ9H1D9 316 aaPredicted RBP19.5■□□□□ 0.71
MUC1-224ENST00000611577 XPNPEP1Q9NQW7 623 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 TBC1D13Q9NVG8 400 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 CIZ1Q9ULV3 898 aaPredicted RBP19.5■□□□□ 0.71
MUC1-224ENST00000611577 PIN4Q9Y237 131 aaKnown RBP19.5■□□□□ 0.71
MUC1-224ENST00000611577 USTQ9Y2C2 406 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 IRAK3Q9Y616 596 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 RIF1Q5UIP0 2472 aaKnown RBP19.5■□□□□ 0.71
MUC1-224ENST00000611577 MYO10Q9HD67 2058 aa19.5■□□□□ 0.71
MUC1-224ENST00000611577 A0A087WZ62 844 aa19.49■□□□□ 0.71
MUC1-224ENST00000611577 CARNS1A5YM72 827 aa19.49■□□□□ 0.71
MUC1-224ENST00000611577 SPDYE4A6NLX3 237 aa19.49■□□□□ 0.71
MUC1-224ENST00000611577 SRGAP2CP0DJJ0 459 aa19.49■□□□□ 0.71
MUC1-224ENST00000611577 CYP11B2P19099 503 aa19.49■□□□□ 0.71
MUC1-224ENST00000611577 RNASELQ05823 741 aaKnown RBP19.49■□□□□ 0.71
MUC1-224ENST00000611577 LAMTOR4Q0VGL1 99 aa19.49■□□□□ 0.71
MUC1-224ENST00000611577 DHX8Q14562 1220 aaKnown RBP19.49■□□□□ 0.71
MUC1-224ENST00000611577 RRAGBQ5VZM2 374 aa19.49■□□□□ 0.71
MUC1-224ENST00000611577 KCNK18Q7Z418 384 aa19.49■□□□□ 0.71
MUC1-224ENST00000611577 KSR1Q8IVT5 923 aa19.49■□□□□ 0.71
MUC1-224ENST00000611577 SLC22A17Q8WUG5 538 aa19.49■□□□□ 0.71
MUC1-224ENST00000611577 FDXACB1Q9BRP7 624 aaPredicted RBP19.49■□□□□ 0.71
MUC1-224ENST00000611577 SCAND2PQ9GZW5 306 aaPredicted RBP19.49■□□□□ 0.71
MUC1-224ENST00000611577 GBP3Q9H0R5 595 aa19.49■□□□□ 0.71
MUC1-224ENST00000611577 NRDE2Q9H7Z3 1164 aa19.49■□□□□ 0.71
MUC1-224ENST00000611577 RBM19Q9Y4C8 960 aaKnown RBP19.49■□□□□ 0.71
MUC1-224ENST00000611577 PRR23AA6NEV1 266 aa19.48■□□□□ 0.71
MUC1-224ENST00000611577 GALTP07902 379 aa19.48■□□□□ 0.71
MUC1-224ENST00000611577 PLA2G4BP0C869 781 aa19.48■□□□□ 0.71
MUC1-224ENST00000611577 SKIP12755 728 aa19.48■□□□□ 0.71
MUC1-224ENST00000611577 DDIT3P35638 169 aa19.48■□□□□ 0.71
MUC1-224ENST00000611577 NBL1P41271 181 aa19.48■□□□□ 0.71
MUC1-224ENST00000611577 STAT6P42226 847 aa19.48■□□□□ 0.71
MUC1-224ENST00000611577 NOMO2Q5JPE7 1267 aa19.48■□□□□ 0.71
MUC1-224ENST00000611577 CCDC73Q6ZRK6 1079 aa19.48■□□□□ 0.71
MUC1-224ENST00000611577 USP49Q70CQ1 688 aa19.48■□□□□ 0.71
MUC1-224ENST00000611577 RNF149Q8NC42 400 aa19.48■□□□□ 0.71
MUC1-224ENST00000611577 FEZF2Q8TBJ5 459 aa19.48■□□□□ 0.71
MUC1-224ENST00000611577 TRAIPQ9BWF2 469 aa19.48■□□□□ 0.71
MUC1-224ENST00000611577 SFXN1Q9H9B4 322 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms