RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 EMILIN2Q9BXX0 1053 aa24.05■■□□□ 1.44
CBWD3-207ENST00000611426 GPRC5CQ9NQ84 441 aa24.05■■□□□ 1.44
CBWD3-207ENST00000611426 LRRIQ4A6NIV6 560 aa24.04■■□□□ 1.44
CBWD3-207ENST00000611426 B4GALT5O43286 388 aa24.04■■□□□ 1.44
CBWD3-207ENST00000611426 MTHFRP42898 656 aa24.04■■□□□ 1.44
CBWD3-207ENST00000611426 TTC38Q5R3I4 469 aa24.04■■□□□ 1.44
CBWD3-207ENST00000611426 COLGALT2Q8IYK4 626 aa24.04■■□□□ 1.44
CBWD3-207ENST00000611426 POMKQ9H5K3 350 aa24.04■■□□□ 1.44
CBWD3-207ENST00000611426 MRPL17Q9NRX2 175 aaKnown RBP24.04■■□□□ 1.44
CBWD3-207ENST00000611426 MIOSQ9NXC5 875 aa24.04■■□□□ 1.44
CBWD3-207ENST00000611426 GIT1Q9Y2X7 761 aa24.04■■□□□ 1.44
CBWD3-207ENST00000611426 PRG3Q9Y2Y8 225 aaPredicted RBP24.04■■□□□ 1.44
CBWD3-207ENST00000611426 INPPL1O15357 1258 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 TRAK2O60296 914 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 WEE2P0C1S8 567 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 KLRC2P26717 231 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 RPA1P27694 616 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 SCNN1GP51170 649 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 KRT85P78386 507 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 ATAT1Q5SQI0 421 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 KANK3Q6NY19 840 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 SLC27A1Q6PCB7 646 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 POTEGQ6S5H5 508 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 BRAPQ7Z569 592 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 BMP8AQ7Z5Y6 402 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 ZBTB33Q86T24 672 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 CABP7Q86V35 215 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 CDR2LQ86X02 465 aaPredicted RBP24.03■■□□□ 1.44
CBWD3-207ENST00000611426 NOSTRINQ8IVI9 506 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 PBXIP1Q96AQ6 731 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 ZFP42Q96MM3 310 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 KLHL5Q96PQ7 755 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 NXF3Q9H4D5 531 aaKnown RBP24.03■■□□□ 1.44
CBWD3-207ENST00000611426 A0A1B0GUA9 196 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 NR1I2O75469 434 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 NPTXRO95502 500 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 PTPN21Q16825 1174 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 KCNH6Q9H252 994 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 PRMT7Q9NVM4 692 aaPredicted RBP24.03■■□□□ 1.44
CBWD3-207ENST00000611426 MARCH5Q9NX47 278 aa24.03■■□□□ 1.44
CBWD3-207ENST00000611426 NOL7Q9UMY1 257 aaKnown RBP24.03■■□□□ 1.44
CBWD3-207ENST00000611426 WDFY4Q6ZS81 3184 aa24.02■■□□□ 1.44
CBWD3-207ENST00000611426 SPDYE4A6NLX3 237 aa24.02■■□□□ 1.44
CBWD3-207ENST00000611426 SOD2P04179 222 aa24.02■■□□□ 1.44
CBWD3-207ENST00000611426 CNPP09543 421 aaKnown RBP24.02■■□□□ 1.44
CBWD3-207ENST00000611426 AKAP5P24588 427 aa24.02■■□□□ 1.44
CBWD3-207ENST00000611426 TRAPPC10P48553 1259 aa24.02■■□□□ 1.44
CBWD3-207ENST00000611426 DNM1Q05193 864 aaKnown RBP24.02■■□□□ 1.44
CBWD3-207ENST00000611426 DSC1Q08554 894 aa24.02■■□□□ 1.44
CBWD3-207ENST00000611426 SIGLEC14Q08ET2 396 aa24.02■■□□□ 1.44
CBWD3-207ENST00000611426 KLHL40Q2TBA0 621 aa24.02■■□□□ 1.44
CBWD3-207ENST00000611426 PADI6Q6TGC4 694 aa24.02■■□□□ 1.44
CBWD3-207ENST00000611426 ZBTB8OSQ8IWT0 167 aa24.02■■□□□ 1.44
CBWD3-207ENST00000611426 CHAMP1Q96JM3 812 aa24.02■■□□□ 1.44
CBWD3-207ENST00000611426 SSX2IPQ9Y2D8 614 aa24.02■■□□□ 1.44
CBWD3-207ENST00000611426 TDRD15B5MCY1 1934 aaKnown RBP24.01■■□□□ 1.43
CBWD3-207ENST00000611426 ARHGEF35A5YM69 484 aa24.01■■□□□ 1.43
CBWD3-207ENST00000611426 C2CD2LO14523 706 aa24.01■■□□□ 1.43
CBWD3-207ENST00000611426 LILRB3O75022 631 aa24.01■■□□□ 1.43
CBWD3-207ENST00000611426 URODP06132 367 aa24.01■■□□□ 1.43
CBWD3-207ENST00000611426 KIAA1841Q6NSI8 718 aa24.01■■□□□ 1.43
CBWD3-207ENST00000611426 TAS1R1Q7RTX1 841 aa24.01■■□□□ 1.43
CBWD3-207ENST00000611426 PRIMPOLQ96LW4 560 aa24.01■■□□□ 1.43
CBWD3-207ENST00000611426 FBXL18Q96ME1 805 aa24.01■■□□□ 1.43
CBWD3-207ENST00000611426 COLEC11Q9BWP8 271 aa24.01■■□□□ 1.43
CBWD3-207ENST00000611426 SCAND2PQ9GZW5 306 aaPredicted RBP24.01■■□□□ 1.43
CBWD3-207ENST00000611426 PARP2Q9UGN5 583 aa24.01■■□□□ 1.43
CBWD3-207ENST00000611426 C2CD4DB7Z1M9 353 aa24■■□□□ 1.43
CBWD3-207ENST00000611426 CYP11B2P19099 503 aa24■■□□□ 1.43
CBWD3-207ENST00000611426 HOXD11P31277 338 aaPredicted RBP24■■□□□ 1.43
CBWD3-207ENST00000611426 CLCN4P51793 760 aa24■■□□□ 1.43
CBWD3-207ENST00000611426 HAUS3Q68CZ6 603 aa24■■□□□ 1.43
CBWD3-207ENST00000611426 CDCA2Q69YH5 1023 aaPredicted RBP24■■□□□ 1.43
CBWD3-207ENST00000611426 TMC5Q6UXY8 1006 aa24■■□□□ 1.43
CBWD3-207ENST00000611426 PPP4R3CPQ6ZMV5 832 aa24■■□□□ 1.43
CBWD3-207ENST00000611426 HERC2P3Q9BVR0 1158 aa24■■□□□ 1.43
CBWD3-207ENST00000611426 C2orf40Q9H1Z8 148 aa24■■□□□ 1.43
CBWD3-207ENST00000611426 FZD8Q9H461 694 aa24■■□□□ 1.43
CBWD3-207ENST00000611426 SFXN1Q9H9B4 322 aa24■■□□□ 1.43
CBWD3-207ENST00000611426 KLK14Q9P0G3 267 aa24■■□□□ 1.43
CBWD3-207ENST00000611426 PRPF40AO75400 957 aaKnown RBP23.99■■□□□ 1.43
CBWD3-207ENST00000611426 MBD3O95983 291 aa23.99■■□□□ 1.43
CBWD3-207ENST00000611426 MUTP22033 750 aa23.99■■□□□ 1.43
CBWD3-207ENST00000611426 U2AF2P26368 475 aaKnown RBP eCLIP23.99■■□□□ 1.43
CBWD3-207ENST00000611426 CCT6AP40227 531 aaKnown RBP23.99■■□□□ 1.43
CBWD3-207ENST00000611426 SUGP1Q8IWZ8 645 aaKnown RBP23.99■■□□□ 1.43
CBWD3-207ENST00000611426 GSTCDQ8NEC7 633 aa23.99■■□□□ 1.43
CBWD3-207ENST00000611426 RPS6KC1Q96S38 1066 aa23.99■■□□□ 1.43
CBWD3-207ENST00000611426 LRWD1Q9UFC0 647 aa23.99■■□□□ 1.43
CBWD3-207ENST00000611426 ZNF318Q5VUA4 2279 aa23.99■■□□□ 1.43
CBWD3-207ENST00000611426 FXR2P51116 673 aaKnown RBP eCLIP23.98■■□□□ 1.43
CBWD3-207ENST00000611426 FAM187BQ17R55 369 aa23.98■■□□□ 1.43
CBWD3-207ENST00000611426 TMEM132AQ24JP5 1023 aa23.98■■□□□ 1.43
CBWD3-207ENST00000611426 C4orf32Q8N8J7 132 aa23.98■■□□□ 1.43
CBWD3-207ENST00000611426 CFAP45Q9UL16 551 aa23.98■■□□□ 1.43
CBWD3-207ENST00000611426 MYO10Q9HD67 2058 aa23.97■■□□□ 1.43
CBWD3-207ENST00000611426 F8W810 466 aa23.97■■□□□ 1.43
CBWD3-207ENST00000611426 GLUD2P49448 558 aa23.97■■□□□ 1.43
CBWD3-207ENST00000611426 PRPF4BQ13523 1007 aaKnown RBP23.97■■□□□ 1.43
CBWD3-207ENST00000611426 MAPK6Q16659 721 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms